Detection of a SARS-CoV-2 variant of concern in South Africa H Tegally, E Wilkinson, M Giovanetti, A Iranzadeh, V Fonseca, ... Nature 592 (7854), 438-443, 2021 | 1484 | 2021 |
Rapid epidemic expansion of the SARS-CoV-2 Omicron variant in southern Africa R Viana, S Moyo, DG Amoako, H Tegally, C Scheepers, CL Althaus, ... Nature 603 (7902), 679-686, 2022 | 1450 | 2022 |
Emergence and rapid spread of a new severe acute respiratory syndrome-related coronavirus 2 (SARS-CoV-2) lineage with multiple spike mutations in South Africa H Tegally, E Wilkinson, M Giovanetti, A Iranzadeh, V Fonseca, ... medrxiv, 2020.12. 21.20248640, 2020 | 1205 | 2020 |
Sixteen novel lineages of SARS-CoV-2 in South Africa H Tegally, E Wilkinson, RJ Lessells, J Giandhari, S Pillay, N Msomi, ... Nature medicine 27 (3), 440-446, 2021 | 366 | 2021 |
Global epidemiology of drug resistance after failure of WHO recommended first-line regimens for adult HIV-1 infection: a multicentre retrospective cohort study J Gregson, M Tang, N Ndembi, RL Hamers, SY Rhee, VC Marconi, ... The Lancet infectious diseases 16 (5), 565-575, 2016 | 287 | 2016 |
Comorbidities in SARS-CoV-2 patients: a systematic review and meta-analysis WH Ng, T Tipih, NA Makoah, JG Vermeulen, D Goedhals, JB Sempa, ... MBio 12 (1), 10.1128/mbio. 03647-20, 2021 | 223 | 2021 |
Kosakovsky Pond SL, Weaver S, Martin D, Lessells RJ, Bhiman JN, Williamson C, de Oliveira T. Detection of a SARS-CoV-2 variant of concern in South Africa H Tegally, E Wilkinson, M Giovanetti, A Iranzadeh, V Fonseca, ... Nature 592 (7854), 438-443, 2021 | 215 | 2021 |
A year of genomic surveillance reveals how the SARS-CoV-2 pandemic unfolded in Africa E Wilkinson, M Giovanetti, H Tegally, JE San, R Lessells, D Cuadros, ... Science 374 (6566), 423-431, 2021 | 196 | 2021 |
Emergence of a SARS-CoV-2 variant of concern with mutations in spike glycoprotein H Tegally, E Wilkinson, M Giovanetti, A Iranzadeh, V Fonseca, ... Nature 592 (7854), 438-443, 2021 | 146 | 2021 |
The evolving SARS-CoV-2 epidemic in Africa: Insights from rapidly expanding genomic surveillance H Tegally, JE San, M Cotten, M Moir, B Tegomoh, G Mboowa, DP Martin, ... Science 378 (6615), eabq5358, 2022 | 96 | 2022 |
HIV-1 and SARS-CoV-2: Patterns in the evolution of two pandemic pathogens W Fischer, EE Giorgi, S Chakraborty, K Nguyen, T Bhattacharya, J Theiler, ... Cell host & microbe 29 (7), 1093-1110, 2021 | 85 | 2021 |
Progression to AIDS in South Africa is associated with both reverting and compensatory viral mutations KHG Huang, D Goedhals, JM Carlson, MA Brockman, S Mishra, ... PloS one 6 (4), e19018, 2011 | 77 | 2011 |
A systematic review of hepatitis B virus (HBV) drug and vaccine escape mutations in Africa: A call for urgent action J Mokaya, AL McNaughton, MJ Hadley, A Beloukas, AM Geretti, ... PLoS neglected tropical diseases 12 (8), e0006629, 2018 | 74 | 2018 |
HLA-A* 7401–mediated control of HIV viremia is independent of its linkage disequilibrium with HLA-B* 5703 PC Matthews, E Adland, J Listgarten, A Leslie, N Mkhwanazi, JM Carlson, ... The Journal of Immunology 186 (10), 5675-5686, 2011 | 62 | 2011 |
Moderate levels of pre-treatment HIV-1 antiretroviral drug resistance detected in the first South African National Survey K Steegen, S Carmona, M Bronze, MA Papathanasopoulos, G Van Zyl, ... PloS one 11 (12), e0166305, 2016 | 58 | 2016 |
HIV-1 antiretroviral drug resistance patterns in patients failing NNRTI-based treatment: results from a national survey in South Africa K Steegen, M Bronze, MA Papathanasopoulos, G van Zyl, D Goedhals, ... Journal of Antimicrobial Chemotherapy 72 (1), 210-219, 2016 | 55 | 2016 |
Rapid replacement of the Beta variant by the Delta variant in South Africa H Tegally, E Wilkinson, CL Althaus, M Giovanetti, JE San, J Giandhari, ... MedRxiv, 2021.09. 23.21264018, 2021 | 54 | 2021 |
Hepatitis B virus seroepidemiology data for Africa: Modelling intervention strategies based on a systematic review and meta-analysis AL McNaughton, J Lourenço, PA Bester, J Mokaya, SF Lumley, U Obolski, ... PLoS medicine 17 (4), e1003068, 2020 | 54 | 2020 |
Long-lived CD8+ T cell responses following Crimean-Congo haemorrhagic fever virus infection D Goedhals, JT Paweska, FJ Burt PLoS neglected tropical diseases 11 (12), e0006149, 2017 | 52 | 2017 |
HIV control through a single nucleotide on the HLA-B locus HN Kløverpris, M Harndahl, AJ Leslie, JM Carlson, N Ismail, ... Journal of virology 86 (21), 11493-11500, 2012 | 51 | 2012 |