CellMarker: a manually curated resource of cell markers in human and mouse X Zhang, Y Lan, J Xu, F Quan, E Zhao, C Deng, T Luo, L Xu, G Liao, ... Nucleic acids research 47 (D1), D721-D728, 2019 | 1064 | 2019 |
A comprehensive overview of lncRNA annotation resources J Xu, J Bai, X Zhang, Y Lv, Y Gong, L Liu, H Zhao, F Yu, Y Ping, G Zhang, ... Briefings in bioinformatics 18 (2), 236-249, 2017 | 164 | 2017 |
Identification of cancer-related lncRNAs through integrating genome, regulome and transcriptome features T Zhao, J Xu, L Liu, J Bai, C Xu, Y Xiao, X Li, L Zhang Molecular BioSystems 11 (1), 126-136, 2015 | 101 | 2015 |
Breast cancer prognosis signature: linking risk stratification to disease subtypes F Yu, F Quan, J Xu, Y Zhang, Y Xie, J Zhang, Y Lan, H Yuan, H Zhang, ... Briefings in Bioinformatics 20 (6), 2130-2140, 2019 | 79 | 2019 |
Single‐cell RNA‐seq reveals the invasive trajectory and molecular cascades underlying glioblastoma progression B Pang, J Xu, J Hu, F Guo, L Wan, M Cheng, L Pang Molecular oncology 13 (12), 2588-2603, 2019 | 44 | 2019 |
Sex difference of mutation clonality in diffuse glioma evolution H Zhang, J Liao, X Zhang, E Zhao, X Liang, S Luo, J Shi, F Yu, J Xu, ... Neuro-oncology 21 (2), 201-213, 2019 | 42 | 2019 |
Systematically characterizing dysfunctional long intergenic non-coding RNAs in multiple brain regions of major psychosis J Hu, J Xu, L Pang, H Zhao, F Li, Y Deng, L Liu, Y Lan, X Zhang, T Zhao, ... Oncotarget 7 (44), 71087, 2016 | 42 | 2016 |
Genome-wide DNA methylome reveals the dysfunction of intronic microRNAs in major psychosis H Zhao, J Xu, L Pang, Y Zhang, H Fan, L Liu, T Liu, F Yu, G Zhang, Y Lan, ... BMC medical genomics 8 (1), 1-12, 2015 | 37 | 2015 |
Computational identification of epigenetically regulated lncRNAs and their associated genes based on integrating genomic data T Zhao, J Xu, L Liu, J Bai, L Wang, Y Xiao, X Li, L Zhang FEBS letters 589 (4), 521-531, 2015 | 31 | 2015 |
Gene Perturbation Atlas (GPA): a single-gene perturbation repository for characterizing functional mechanisms of coding and non-coding genes Y Xiao, Y Gong, Y Lv, Y Lan, J Hu, F Li, J Xu, J Bai, Y Deng, L Liu, ... Scientific reports 5 (1), 1-9, 2015 | 26 | 2015 |
Predicting the functions of long noncoding RNAs using RNA-seq based on Bayesian network Y Xiao, Y Lv, H Zhao, Y Gong, J Hu, F Li, J Xu, J Bai, F Yu, X Li BioMed research international 2015, 2015 | 25 | 2015 |
Capturing functional long non-coding RNAs through integrating large-scale causal relations from gene perturbation experiments J Xu, A Shi, Z Long, L Xu, G Liao, C Deng, M Yan, A Xie, T Luo, J Huang, ... EBioMedicine 35, 369-380, 2018 | 23 | 2018 |
Combination of multiple tumor-infiltrating immune cells predicts clinical outcome in colon cancer X Zhang, F Quan, J Xu, Y Xiao, X Li, Y Li Clinical Immunology, 108412, 2020 | 22 | 2020 |
Dysregulated long intergenic non-coding RNA modules contribute to heart failure L Pang, J Hu, G Zhang, X Li, X Zhang, F Yu, Y Lan, J Xu, B Pang, D Han, ... Oncotarget 7 (37), 59676, 2016 | 18 | 2016 |
Aberrant epigenetic modifications of non-coding RNAs in human disease Y Xiao, J Xu, W Yin Non-coding RNAs in Complex Diseases, 65-75, 2018 | 16 | 2018 |
Identification of dysregulated competitive endogenous RNA networks driven by copy number variations in malignant gliomas J Xu, X Hou, L Pang, S Sun, S He, Y Yang, K Liu, L Xu, W Yin, C Xu, ... Frontiers in genetics 10, 1055, 2019 | 10 | 2019 |
Transcriptome analysis reveals a long non-coding RNA signature to improve biochemical recurrence prediction in prostate cancer J Xu, Y Lan, F Yu, S Zhu, J Ran, J Zhu, H Zhang, L Li, S Cheng, Y Xiao, ... Oncotarget 9 (38), 24936, 2018 | 8 | 2018 |
Identification of a six-lncRNA signature with prognostic value for breast cancer patients E Zhao, Y Lan, F Quan, X Zhu, L Wan, J Xu, J Hu Frontiers in Genetics 11, 673, 2020 | 7 | 2020 |
Transcriptome analysis reveals a reprogramming energy metabolism-related signature to improve prognosis in colon cancer X Zhang, J Xu, Y Lan, F Guo, Y Xiao, Y Li, X Li PeerJ 8, e9458, 2020 | 1 | 2020 |
IPEV: a web server for inferring pathogenic enhancers with variants G Zhang, A Xie, J Bai, T Luo, H Yuan, G Liao, S Luo, J Liao, J Xu, J Shi, ... | 1 | 2019 |