Fast and compact DNA logic circuits based on single-stranded gates using strand-displacing polymerase T Song, A Eshra, S Shah, H Bui, D Fu, M Yang, R Mokhtar, J Reif Nature nanotechnology 14 (11), 1075-1081, 2019 | 176 | 2019 |
Localized DNA hybridization chain reactions on DNA origami H Bui, S Shah, R Mokhtar, T Song, S Garg, J Reif ACS nano 12 (2), 1146-1155, 2018 | 132 | 2018 |
Renewable Time‐Responsive DNA Circuits S Garg, S Shah, H Bui, T Song, R Mokhtar, J Reif Small 14 (33), 1801470, 2018 | 58 | 2018 |
Programming DNA-based biomolecular reaction networks on cancer cell membranes T Song, S Shah, H Bui, S Garg, A Eshra, D Fu, M Yang, R Mokhtar, J Reif Journal of the American Chemical Society 141 (42), 16539-16543, 2019 | 55 | 2019 |
Renewable DNA hairpin-based logic circuits A Eshra, S Shah, T Song, J Reif IEEE Transactions on Nanotechnology, 2019 | 49* | 2019 |
Using strand displacing polymerase to program chemical reaction networks S Shah, J Wee, T Song, L Ceze, K Strauss, YJ Chen, J Reif Journal of the American Chemical Society 142 (21), 9587-9593, 2020 | 43 | 2020 |
An Overview of DNA‐Based Digital Data Storage X Song, S Shah, J Reif DNA‐and RNA‐Based Computing Systems, 345-352, 2021 | 36* | 2021 |
DNACloud: A potential tool for storing big data on DNA S Shah, D Limbachiya, MK Gupta arXiv preprint arXiv:1310.6992, 2013 | 26* | 2013 |
Programming temporal DNA barcodes for single-molecule fingerprinting S Shah, AK Dubey, J Reif Nano letters 19 (4), 2668-2673, 2019 | 25 | 2019 |
Molecular Computation via Polymerase Strand Displacement Reactions S Shah, M Yang, T Song, J Reif Handbook of Unconventional Computing: VOLUME 2: Implementations, 165-179, 2021 | 23* | 2021 |
DNA-Based Analog Computing D Fu, S Shah, T Song, J Reif Synthetic Biology: Methods and Protocols, 411-417, 2018 | 17* | 2018 |
Improved optical multiplexing with temporal DNA barcodes S Shah, AK Dubey, J Reif ACS Synthetic Biology 8 (5), 1100-1111, 2019 | 15 | 2019 |
Nucleic Acid Hairpins: A Robust and Powerful Motif for Molecular Devices S Garg, H Bui, A Eshra, S Shah, J Reif Soft Nanomaterials, 175-199, 2019 | 14* | 2019 |
Multidimensional data organization and random access in large-scale DNA storage systems X Song, S Shah, J Reif Theoretical Computer Science 894, 190-202, 2021 | 12 | 2021 |
Implementing arbitrary CRNs using strand displacing polymerase S Shah, T Song, X Song, M Yang, J Reif International Conference on DNA Computing and Molecular Programming, 21-36, 2019 | 8* | 2019 |
Temporal DNA barcodes: A time-based approach for single-molecule imaging S Shah, J Reif DNA Computing and Molecular Programming: 24th International Conference, DNA …, 2018 | 8 | 2018 |
The systems biology simulation core library H Panchiwala, S Shah, H Planatscher, M Zakharchuk, M König, A Dräger Bioinformatics 38 (3), 864-865, 2022 | 7 | 2022 |
ULTRA: Unleash LLMs' Potential for Event Argument Extraction through Hierarchical Modeling and Pair-wise Refinement XF Zhang, C Blum, T Choji, S Shah, A Vempala arXiv preprint arXiv:2401.13218, 2024 | 6 | 2024 |
Computing real numbers using DNA self-assembly S Shah, P Dave, MK Gupta arXiv preprint arXiv:1502.05552, 2015 | 6 | 2015 |
DNA Origami Transformers R Mokhtar, T Song, D Fu, S Shah, X Song, M Yang, J Reif DNA‐and RNA‐Based Computing Systems, 307-326, 2021 | 5 | 2021 |