Global and regional molecular epidemiology of HIV-1, 1990–2015: a systematic review, global survey, and trend analysis J Hemelaar, R Elangovan, J Yun, L Dickson-Tetteh, I Fleminger, S Kirtley, ... The Lancet infectious diseases 19 (2), 143-155, 2019 | 360 | 2019 |
Founder effects in the assessment of HIV polymorphisms and HLA allele associations T Bhattacharya, M Daniels, D Heckerman, B Foley, N Frahm, C Kadie, ... science 315 (5818), 1583-1586, 2007 | 306 | 2007 |
CD39/adenosine pathway is involved in AIDS progression M Nikolova, M Carriere, MA Jenabian, S Limou, M Younas, A Kök, S Huë, ... PLoS pathogens 7 (7), e1002110, 2011 | 205 | 2011 |
Polymorphisms of large effect explain the majority of the host genetic contribution to variation of HIV-1 virus load PJ McLaren, C Coulonges, I Bartha, TL Lenz, AJ Deutsch, A Bashirova, ... Proceedings of the National Academy of Sciences 112 (47), 14658-14663, 2015 | 179 | 2015 |
Association study of common genetic variants and HIV-1 acquisition in 6,300 infected cases and 7,200 controls PJ McLaren, C Coulonges, S Ripke, L Van Den Berg, S Buchbinder, ... PLoS pathogens 9 (7), e1003515, 2013 | 137 | 2013 |
Viral evolution and escape during acute HIV-1 infection CL Boutwell, MM Rolland, JT Herbeck, JI Mullins, TM Allen The Journal of infectious diseases 202 (Suppl 2), S309, 2010 | 137 | 2010 |
Human Immunodeficiency Virus Type 1 env Evolves toward Ancestral States upon Transmission to a New Host JT Herbeck, DC Nickle, GH Learn, GS Gottlieb, ME Curlin, L Heath, ... Journal of virology 80 (4), 1637-1644, 2006 | 134 | 2006 |
Demographic processes affect HIV-1 evolution in primary infection before the onset of selective processes JT Herbeck, M Rolland, Y Liu, S McLaughlin, J McNevin, H Zhao, K Wong, ... Journal of virology 85 (15), 7523-7534, 2011 | 108 | 2011 |
Phylogenetic studies of transmission dynamics in generalized HIV epidemics: an essential tool where the burden is greatest? AM Dennis, JT Herbeck, AL Brown, P Kellam, T de Oliveira, D Pillay, ... JAIDS Journal of Acquired Immune Deficiency Syndromes 67 (2), 181-195, 2014 | 107 | 2014 |
Multiple-cohort genetic association study reveals CXCR6 as a new chemokine receptor involved in long-term nonprogression to AIDS S Limou, C Coulonges, JT Herbeck, D Van Manen, P An, S Le Clerc, ... The Journal of infectious diseases 202 (6), 908-915, 2010 | 107 | 2010 |
Is the virulence of HIV changing? A meta-analysis of trends in prognostic markers of HIV disease progression and transmission JT Herbeck, V Müller, BS Maust, B Ledergerber, C Torti, ... Aids 26 (2), 193-205, 2012 | 100 | 2012 |
Multistage genomewide association study identifies a locus at 1q41 associated with rate of HIV-1 disease progression to clinical AIDS JT Herbeck, GS Gottlieb, CA Winkler, GW Nelson, P An, BS Maust, ... The Journal of infectious diseases 201 (4), 618-626, 2010 | 100 | 2010 |
Mechanisms of sperm transfer and storage in the red flour beetle (Coleoptera: Tenebrionidae) MCB Qazi, JT Herbeck, SM Lewis Annals of the Entomological Society of America 89 (6), 892-897, 1996 | 92 | 1996 |
Nonhomogeneous model of sequence evolution indicates independent origins of primary endosymbionts within the Enterobacteriales (γ-Proteobacteria) JT Herbeck, PH Degnan, JJ Wernegreen Molecular biology and evolution 22 (3), 520-532, 2005 | 77 | 2005 |
A transmission-virulence evolutionary trade-off explains attenuation of HIV-1 in Uganda F Blanquart, MK Grabowski, J Herbeck, F Nalugoda, D Serwadda, ... Elife 5, e20492, 2016 | 75 | 2016 |
Global and regional epidemiology of HIV-1 recombinants in 1990–2015: a systematic review and global survey J Hemelaar, R Elangovan, J Yun, L Dickson-Tetteh, S Kirtley, ... The Lancet HIV 7 (11), e772-e781, 2020 | 72 | 2020 |
Gene expression level influences amino acid usage, but not codon usage, in the tsetse fly endosymbiont Wigglesworthia JT Herbeck, DP Wall, JJ Wernegreen Microbiology 149 (9), 2585-2596, 2003 | 68 | 2003 |
A Conservative Test of Genetic Drift in the Endosymbiotic Bacterium Buchnera: Slightly Deleterious Mutations in the Chaperonin groEL JT Herbeck, DJ Funk, PH Degnan, JJ Wernegreen Genetics 165 (4), 1651-1660, 2003 | 63 | 2003 |
PANGEA-HIV: phylogenetics for generalised epidemics in Africa D Pillay, J Herbeck, MS Cohen, T de Oliveira, C Fraser, O Ratmann, ... The Lancet Infectious Diseases 15 (3), 259-261, 2015 | 60 | 2015 |
Lack of evidence for changing virulence of HIV-1 in North America JT Herbeck, GS Gottlieb, X Li, Z Hu, R Detels, J Phair, C Rinaldo, ... PLoS One 3 (2), e1525, 2008 | 54 | 2008 |