| PolymiRTS Database 3.0: linking polymorphisms in microRNAs and their target sites with human diseases and biological pathways A Bhattacharya, JD Ziebarth, Y Cui Nucleic acids research 42 (D1), D86-D91, 2014 | 365 | 2014 |
| Understanding the protonation behavior of linear polyethylenimine in solutions through Monte Carlo simulations JD Ziebarth, Y Wang Biomacromolecules 11 (1), 29-38, 2010 | 221 | 2010 |
| CTCFBSDB 2.0: a database for CTCF-binding sites and genome organization JD Ziebarth, A Bhattacharya, Y Cui Nucleic acids research 41 (D1), D188-D194, 2012 | 168 | 2012 |
| PolymiRTS Database 2.0: linking polymorphisms in microRNA target sites with human diseases and complex traits JD Ziebarth, A Bhattacharya, A Chen, Y Cui Nucleic acids research 40 (D1), D216-D221, 2012 | 141 | 2012 |
| Molecular dynamics simulations of DNA-polycation complex formation J Ziebarth, Y Wang Biophysical journal 97 (7), 1971-1983, 2009 | 113 | 2009 |
| Integrative analysis of somatic mutations altering microRNA targeting in cancer genomes JD Ziebarth, A Bhattacharya, Y Cui Public Library of Science 7 (10), e47137, 2012 | 83 | 2012 |
| SomamiR: a database for somatic mutations impacting microRNA function in cancer A Bhattacharya, JD Ziebarth, Y Cui Nucleic acids research 41 (D1), D977-D982, 2013 | 81 | 2013 |
| Pre‐transplant predictors of one yr weight gain after kidney transplantation AK Cashion, DK Hathaway, A Stanfill, F Thomas, JD Ziebarth, Y Cui, ... Clinical transplantation 28 (11), 1271-1278, 2014 | 63 | 2014 |
| Photosensitizer-loaded gold nanorods for near infrared photodynamic and photothermal cancer therapy S Bhana, R O’Connor, J Johnson, JD Ziebarth, L Henderson, X Huang Journal of colloid and interface science 469, 8-16, 2016 | 47 | 2016 |
| Coarse-grained molecular dynamics simulations of DNA condensation by block copolymer and formation of core− corona structures J Ziebarth, Y Wang The Journal of Physical Chemistry B 114 (19), 6225-6232, 2010 | 47 | 2010 |
| Retention behavior of star-shaped polystyrene near the chromatographic critical condition K Im, HW Park, Y Kim, S Ahn, T Chang, K Lee, HJ Lee, J Ziebarth, Y Wang Macromolecules 41 (9), 3375-3383, 2008 | 45 | 2008 |
| Effect of the protonation level and ionic strength on the structure of linear polyethyleneimine CE Gallops, C Yu, JD Ziebarth, Y Wang Acs Omega 4 (4), 7255-7264, 2019 | 43 | 2019 |
| Structural comparisons of PEI/DNA and PEI/siRNA complexes revealed with molecular dynamics simulations JD Ziebarth, DR Kennetz, NJ Walker, Y Wang The Journal of Physical Chemistry B 121 (8), 1941-1952, 2017 | 42 | 2017 |
| Comparison of critical adsorption points of ring polymers with linear polymers JD Ziebarth, AA Gardiner, Y Wang, Y Jeong, J Ahn, Y Jin, T Chang Macromolecules 49 (22), 8780-8788, 2016 | 41 | 2016 |
| Dependence of the critical adsorption point on surface and sequence disorders for self-avoiding walks interacting with a planar surface JD Ziebarth, Y Wang, A Polotsky, M Luo Macromolecules 40 (9), 3498-3504, 2007 | 40 | 2007 |
| Bayesian Network Webserver: a comprehensive tool for biological network modeling JD Ziebarth, A Bhattacharya, Y Cui Bioinformatics 29 (21), 2801-2803, 2013 | 34 | 2013 |
| Host genetics and Chlamydia disease: prediction and validation of disease severity mechanisms I Miyairi, J Ziebarth, JD Laxton, X Wang, N van Rooijen, RW Williams, ... PloS one 7 (3), e33781, 2012 | 30 | 2012 |
| Gene-by-environment modulation of lifespan and weight gain in the murine BXD family S Roy, MB Sleiman, P Jha, JF Ingels, CJ Chapman, MS McCarty, ... Nature metabolism 3 (9), 1217-1227, 2021 | 26 | 2021 |
| Comparison of monovalent and divalent ion distributions around a DNA duplex with molecular dynamics simulation and a Poisson‐Boltzmann approach TJ Robbins, JD Ziebarth, Y Wang Biopolymers 101 (8), 834-848, 2014 | 25 | 2014 |
| Selective adsorption of heteropolymer onto heterogeneous surfaces: interplay between sequences and surface patterns JD Ziebarth, J Williams, Y Wang Macromolecules 41 (13), 4929-4936, 2008 | 23 | 2008 |
