SignalP 5.0 improves signal peptide predictions using deep neural networks JJ Almagro Armenteros, KD Tsirigos, CK Sønderby, TN Petersen, ... Nature biotechnology 37 (4), 420-423, 2019 | 3673 | 2019 |
Ladder variational autoencoders CK Sønderby, T Raiko, L Maaløe, SK Sønderby, O Winther Neural Information Processing Systems, 2016 | 1049* | 2016 |
DeepLoc: prediction of protein subcellular localization using deep learning JJ Almagro Armenteros, CK Sønderby, SK Sønderby, H Nielsen, ... Bioinformatics 33 (21), 3387-3395, 2017 | 1047 | 2017 |
NetSurfP‐2.0: Improved prediction of protein structural features by integrated deep learning MS Klausen, MC Jespersen, H Nielsen, KK Jensen, VI Jurtz, ... Proteins: Structure, Function, and Bioinformatics 87 (6), 520-527, 2019 | 534 | 2019 |
Auxiliary deep generative models L Maaløe, CK Sønderby, SK Sønderby, O Winther International conference on machine learning, 1445-1453, 2016 | 527 | 2016 |
Amortised map inference for image super-resolution CK Sønderby, J Caballero, L Theis, W Shi, F Huszár International Conference on Learning Representations (ICLR), 2016 | 526 | 2016 |
BloodSpot: a database of gene expression profiles and transcriptional programs for healthy and malignant haematopoiesis FO Bagger, D Sasivarevic, SH Sohi, LG Laursen, S Pundhir, CK Sønderby, ... Nucleic acids research 44 (D1), D917-D924, 2016 | 315 | 2016 |
Improved metagenome binning and assembly using deep variational autoencoders JN Nissen, J Johansen, RL Allesøe, CK Sønderby, JJA Armenteros, ... Nature biotechnology 39 (5), 555-560, 2021 | 313 | 2021 |
Metnet: A neural weather model for precipitation forecasting CK Sønderby, L Espeholt, J Heek, M Dehghani, A Oliver, T Salimans, ... arXiv preprint arXiv:2003.12140, 2020 | 302 | 2020 |
Orientationally invariant metrics of apparent compartment eccentricity from double pulsed field gradient diffusion experiments SN Jespersen, H Lundell, CK Sønderby, TB Dyrby NMR in Biomedicine 26 (12), 1647-1662, 2013 | 253 | 2013 |
scVAE: variational auto-encoders for single-cell gene expression data CH Grønbech, MF Vording, PN Timshel, CK Sønderby, TH Pers, ... Bioinformatics 36 (16), 4415-4422, 2020 | 205 | 2020 |
An introduction to deep learning on biological sequence data: examples and solutions VI Jurtz, AR Johansen, M Nielsen, JJ Almagro Armenteros, H Nielsen, ... Bioinformatics 33 (22), 3685-3690, 2017 | 175 | 2017 |
Convolutional LSTM networks for subcellular localization of proteins SK Sønderby, CK Sønderby, H Nielsen, O Winther Algorithms for Computational Biology: Second International Conference, AlCoB …, 2015 | 160 | 2015 |
Deep learning for twelve hour precipitation forecasts L Espeholt, S Agrawal, C Sønderby, M Kumar, J Heek, C Bromberg, ... Nature communications 13 (1), 1-10, 2022 | 125 | 2022 |
Recurrent spatial transformer networks SK Sønderby, CK Sønderby, L Maaløe, O Winther arXiv preprint arXiv:1509.05329, 2015 | 70 | 2015 |
Skillful twelve hour precipitation forecasts using large context neural networks L Espeholt, S Agrawal, C Sønderby, M Kumar, J Heek, C Bromberg, ... arXiv preprint arXiv:2111.07470, 2021 | 60 | 2021 |
Idf++: Analyzing and improving integer discrete flows for lossless compression R Berg, AA Gritsenko, M Dehghani, CK Sønderby, T Salimans arXiv preprint arXiv:2006.12459, 2020 | 48 | 2020 |
Tumor suppressor ASXL1 is essential for the activation of INK4B expression in response to oncogene activity and anti-proliferative signals X Wu, IH Bekker-Jensen, J Christensen, KD Rasmussen, S Sidoli, Y Qi, ... Cell research 25 (11), 1205-1218, 2015 | 45 | 2015 |
Diffusion weighted imaging with circularly polarized oscillating gradients H Lundell, CK Sønderby, TB Dyrby Magnetic resonance in medicine 73 (3), 1171-1176, 2015 | 44 | 2015 |
Apparent exchange rate imaging in anisotropic systems CK Sønderby, HM Lundell, LV Søgaard, TB Dyrby Magnetic resonance in medicine 72 (3), 756-762, 2014 | 37 | 2014 |