标题/作者	年份
Rapid epidemic expansion of the SARS-CoV-2 Omicron variant in southern Africa R Viana, S Moyo, DG Amoako, H Tegally, C Scheepers, CL Althaus, ... Nature 603 (7902), 679-686	2022
Evaluating the effects of SARS-CoV-2 spike mutation D614G on transmissibility and pathogenicity E Volz, V Hill, JT McCrone, A Price, D Jorgensen, Á O’Toole, J Southgate, ... Cell 184 (1), 64-75. e11	2021
Variant analysis of SARS-CoV-2 genomes T Koyama, D Platt, L Parida Bulletin of the World Health Organization 98 (7), 495	2020
Spread of a SARS-CoV-2 variant through Europe in the summer of 2020 EB Hodcroft, M Zuber, S Nadeau, TG Vaughan, KHD Crawford, ... Nature 595 (7869), 707-712	2021
Transmission, infectivity, and neutralization of a spike L452R SARS-CoV-2 variant X Deng, MA Garcia-Knight, MM Khalid, V Servellita, C Wang, MK Morris, ... Cell 184 (13), 3426-3437. e8	2021
COVID-19 in Amazonas, Brazil, was driven by the persistence of endemic lineages and P. 1 emergence FG Naveca, V Nascimento, VC de Souza, AL Corado, F Nascimento, ... Nature medicine 27 (7), 1230-1238	2021
HyPhy 2.5—a customizable platform for evolutionary hypothesis testing using phylogenies SL Kosakovsky Pond, AFY Poon, R Velazquez, S Weaver, NL Hepler, ... Molecular biology and evolution 37 (1), 295-299	2020
Phylogenetic tree building in the genomic age P Kapli, Z Yang, MJ Telford Nature Reviews Genetics 21 (7), 428-444	2020
Evolutionary and structural analyses of SARS-CoV-2 D614G spike protein mutation now documented worldwide S Isabel, L Graña-Miraglia, JM Gutierrez, C Bundalovic-Torma, HE Groves, ... Scientific reports 10 (1), 14031	2020
Tracking the COVID-19 pandemic in Australia using genomics T Seemann, CR Lane, NL Sherry, S Duchene, A Gonçalves da Silva, ... Nature communications 11 (1), 1-9	2020
Full genome viral sequences inform patterns of SARS-CoV-2 spread into and within Israel D Miller, MA Martin, N Harel, O Tirosh, T Kustin, M Meir, N Sorek, ... Nature communications 11 (1), 5518	2020
Learning the protein language: Evolution, structure, and function T Bepler, B Berger Cell systems 12 (6), 654-669. e3	2021
The origins and spread of domestic horses from the Western Eurasian steppes P Librado, N Khan, A Fages, MA Kusliy, T Suchan, L Tonasso-Calvière, ... Nature 598 (7882), 634-640	2021
Phylogenomics—principles, opportunities and pitfalls of big‐data phylogenetics AD Young, JP Gillung Systematic Entomology 45 (2), 225-247	2020
Drivers and dynamics of a massive adaptive radiation in cichlid fishes F Ronco, M Matschiner, A Böhne, A Boila, HH Büscher, A El Taher, ... Nature 589 (7840), 76-81	2021
Computational strategies to combat COVID-19: useful tools to accelerate SARS-CoV-2 and coronavirus research F Hufsky, K Lamkiewicz, A Almeida, A Aouacheria, C Arighi, A Bateman, ... Briefings in bioinformatics 22 (2), 642-663	2021
Nucleocapsid mutations R203K/G204R increase the infectivity, fitness, and virulence of SARS-CoV-2 H Wu, N Xing, K Meng, B Fu, W Xue, P Dong, W Tang, Y Xiao, G Liu, ... Cell host & microbe 29 (12), 1788-1801. e6	2021
Phylogenetic systematics and evolution of the spider infraorder Mygalomorphae using genomic scale data V Opatova, CA Hamilton, M Hedin, LM De Oca, J Král, JE Bond Systematic Biology 69 (4), 671-707	2020
The dental proteome of Homo antecessor F Welker, J Ramos-Madrigal, P Gutenbrunner, M Mackie, S Tiwary, ... Nature 580 (7802), 235-238	2020
Exploring the natural origins of SARS-CoV-2 in the light of recombination S Lytras, J Hughes, D Martin, P Swanepoel, A de Klerk, R Lourens, ... Genome Biology and Evolution 14 (2), evac018	2022

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