| Ribosomal ITS sequences and plant phylogenetic inference I Álvarez, JF Wendel Molecular phylogenetics and evolution 29 (3), 417-434, 2003 | 2301 | 2003 |
| Visualization and interpretation of plant isozymes JF Wendel, NF Weeden Isozymes in plant biology, 5-45, 1989 | 2166* | 1989 |
| Genome evolution in polyploids JF Wendel Plant molecular evolution, 225-249, 2000 | 2000 | 2000 |
| Polyploidy and genome evolution in plants KL Adams, JF Wendel Current opinion in plant biology 8 (2), 135-141, 2005 | 1505 | 2005 |
| A rapid method for extraction of cotton (Gossypium spp.) genomic DNA suitable for RFLP or PCR analysis AH Paterson, CL Brubaker, JF Wendel Plant Molecular Biology Reporter 11, 122-127, 1993 | 1280 | 1993 |
| Repeated polyploidization of Gossypium genomes and the evolution of spinnable cotton fibres AH Paterson, JF Wendel, H Gundlach, H Guo, J Jenkins, D Jin, ... Nature 492 (7429), 423-427, 2012 | 1097 | 2012 |
| Bidirectional interlocus concerted evolution following allopolyploid speciation in cotton (Gossypium). JF Wendel, A Schnabel, T Seelanan Proceedings of the National Academy of Sciences 92 (1), 280-284, 1995 | 1011 | 1995 |
| Genes duplicated by polyploidy show unequal contributions to the transcriptome and organ-specific reciprocal silencing KL Adams, R Cronn, R Percifield, JF Wendel Proceedings of the National Academy of sciences 100 (8), 4649-4654, 2003 | 939 | 2003 |
| Molecular-marker-facilitated investigations of quantitative-trait loci in maize. I. Numbers, genomic distribution and types of gene action MD Edwards, CW Stuber, JF Wendel Genetics 116 (1), 113-125, 1987 | 919 | 1987 |
| Polyploidy and the evolutionary history of cotton J Wendel, R Cronn | 892 | 2003 |
| Phylogenetic incongruence: window into genome history and molecular evolution JF Wendel, JJ Doyle Molecular systematics of plants II: DNA sequencing, 265-296, 1998 | 798 | 1998 |
| Introgression and its consequences in plants LH Rieseberg, JF Wendel Hybrid zones and the evolutionary process 70, 109, 1993 | 745 | 1993 |
| Gene duplication and evolutionary novelty in plants LE Flagel, JF Wendel New Phytologist 183 (3), 557-564, 2009 | 724 | 2009 |
| Evolutionary genetics of genome merger and doubling in plants JJ Doyle, LE Flagel, AH Paterson, RA Rapp, DE Soltis, PS Soltis, ... Annual review of genetics 42, 443-461, 2008 | 676 | 2008 |
| Molecular Marker‐Facilitated Investigations of Quantitative Trait Loci in Maize. II. Factors Influencing Yield and its Component Traits1 CW Stuber, MDA Edwards, JF Wendel Crop Science 27 (4), 639-648, 1987 | 651 | 1987 |
| The tortoise and the hare: choosing between noncoding plastome and nuclear Adh sequences for phylogeny reconstruction in a recently diverged plant group RL Small, JA Ryburn, RC Cronn, T Seelanan, JF Wendel American Journal of Botany 85 (9), 1301-1315, 1998 | 604 | 1998 |
| New World tetraploid cottons contain Old World cytoplasm JF Wendel Proceedings of the National Academy of Sciences 86 (11), 4132-4136, 1989 | 599 | 1989 |
| A detailed RFLP map of cotton, Gossypium hirsutum x Gossypium barbadense: chromosome organization and evolution in a disomic polyploid genome. AJ Reinisch, JM Dong, CL Brubaker, DM Stelly, JF Wendel, AH Paterson Genetics 138 (3), 829-847, 1994 | 559 | 1994 |
| Divergent evolution of plant NBS-LRR resistance gene homologues in dicot and cereal genomes Q Pan, J Wendel, R Fluhr Journal of molecular evolution 50, 203-213, 2000 | 546 | 2000 |
| Use of nuclear genes for phylogeny reconstruction in plants RL Small, RC Cronn, JF Wendel Australian Systematic Botany 17 (2), 145-170, 2004 | 544 | 2004 |
