| Amber 2021 DA Case, HM Aktulga, K Belfon, I Ben-Shalom, SR Brozell, DS Cerutti, ... University of California, San Francisco, 2021 | 773 | 2021 |
| Gaussian accelerated molecular dynamics: Unconstrained enhanced sampling and free energy calculation Y Miao, VA Feher, JA McCammon Journal of chemical theory and computation 11 (8), 3584-3595, 2015 | 474 | 2015 |
| Ensemble docking in drug discovery RE Amaro, J Baudry, J Chodera, Ö Demir, JA McCammon, Y Miao, ... Biophysical journal 114 (10), 2271-2278, 2018 | 334 | 2018 |
| Improved reweighting of accelerated molecular dynamics simulations for free energy calculation Y Miao, W Sinko, L Pierce, D Bucher, RC Walker, JA McCammon Journal of chemical theory and computation 10 (7), 2677-2689, 2014 | 328 | 2014 |
| Amber 2015 (University of California, San Francisco) DA Case, IY Ben-Shalom, SR Brozell, DS Cerutti, TE Cheatham III, ... Available from ambermd. org/doc12/Amber15. pdf, 2015 | 291 | 2015 |
| Activation and dynamic network of the M2 muscarinic receptor Y Miao, SE Nichols, PM Gasper, VT Metzger, JA McCammon Proceedings of the National Academy of Sciences 110 (27), 10982-10987, 2013 | 230 | 2013 |
| Accelerated molecular dynamics simulations of protein folding Y Miao, F Feixas, C Eun, JA McCammon Journal of computational chemistry 36 (20), 1536-1549, 2015 | 151 | 2015 |
| CRISPR-Cas9 conformational activation as elucidated from enhanced molecular simulations G Palermo, Y Miao, RC Walker, M Jinek, JA McCammon Proceedings of the National Academy of Sciences 114 (28), 7260-7265, 2017 | 137 | 2017 |
| Accelerated molecular dynamics simulations of ligand binding to a muscarinic G-protein-coupled receptor K Kappel, Y Miao, JA McCammon Quarterly reviews of biophysics 48 (4), 479-487, 2015 | 133 | 2015 |
| Unconstrained enhanced sampling for free energy calculations of biomolecules: a review Y Miao, JA McCammon Molecular simulation 42 (13), 1046-1055, 2016 | 124 | 2016 |
| Graded activation and free energy landscapes of a muscarinic G-protein–coupled receptor Y Miao, JA McCammon Proceedings of the National Academy of Sciences 113 (43), 12162-12167, 2016 | 116 | 2016 |
| Gaussian accelerated molecular dynamics in NAMD YT Pang, Y Miao, Y Wang, JA McCammon Journal of chemical theory and computation 13 (1), 9-19, 2017 | 100 | 2017 |
| Striking plasticity of CRISPR-Cas9 and key role of non-target DNA, as revealed by molecular simulations G Palermo, Y Miao, RC Walker, M Jinek, JA McCammon ACS central science 2 (10), 756-763, 2016 | 96 | 2016 |
| Population based reweighting of scaled molecular dynamics W Sinko, Y Miao, CAF de Oliveira, JA McCammon The Journal of Physical Chemistry B 117 (42), 12759-12768, 2013 | 96 | 2013 |
| AMBER 2018; 2018 DA Case, IY Ben-Shalom, SR Brozell, DS Cerutti, TE Cheatham III, ... University of California, San Francisco, 2018 | 91 | 2018 |
| G-protein coupled receptors: advances in simulation and drug discovery Y Miao, JA McCammon Current opinion in structural biology 41, 83-89, 2016 | 91 | 2016 |
| Mechanism of the G-protein mimetic nanobody binding to a muscarinic G-protein-coupled receptor Y Miao, JA McCammon Proceedings of the National Academy of Sciences 115 (12), 3036-3041, 2018 | 88 | 2018 |
| Gaussian accelerated molecular dynamics: Principles and applications J Wang, PR Arantes, A Bhattarai, RV Hsu, S Pawnikar, YM Huang, ... Wiley Interdisciplinary Reviews: Computational Molecular Science 11 (5), e1521, 2021 | 86 | 2021 |
| Accelerated structure-based design of chemically diverse allosteric modulators of a muscarinic G protein-coupled receptor Y Miao, DA Goldfeld, EV Moo, PM Sexton, A Christopoulos, ... Proceedings of the National Academy of Sciences 113 (38), E5675-E5684, 2016 | 86 | 2016 |
| AMBER; University of California: San Francisco, 2018 DA Case, IY Ben-Shalom, SR Brozell, DS Cerutti, TE Cheatham III, ... Google Scholar There is no corresponding record for this reference, 0 | 86 | |
Prof. J. Andrew McCammonUniversity of California, San Diego在 ucsd.edu 的电子邮件经过验证
