Pangenomic study of Corynebacterium diphtheriae that provides insights into the genomic diversity of pathogenic isolates from cases of classical diphtheria, endocarditis, and … E Trost, J Blom, S de Castro Soares, IH Huang, A Al-Dilaimi, J Schröder, ... Journal of bacteriology 194 (12), 3199-3215, 2012 | 163 | 2012 |
The complete genome sequence of Corynebacterium pseudotuberculosis FRC41 isolated from a 12-year-old girl with necrotizing lymphadenitis reveals insights … E Trost, L Ott, J Schneider, J Schröder, S Jaenicke, A Goesmann, ... BMC genomics 11, 1-17, 2010 | 131 | 2010 |
The pan-genome of the animal pathogen Corynebacterium pseudotuberculosis reveals differences in genome plasticity between the biovar ovis and equi strains SC Soares, A Silva, E Trost, J Blom, R Ramos, A Carneiro, A Ali, ... PLoS One 8 (1), e53818, 2013 | 119 | 2013 |
GIPSy: Genomic island prediction software SC Soares, H Geyik, RTJ Ramos, PHCG de Sá, EGV Barbosa, ... Journal of biotechnology 232, 2-11, 2016 | 116 | 2016 |
Evidence for reductive genome evolution and lateral acquisition of virulence functions in two Corynebacterium pseudotuberculosis strains JC Ruiz, V D'Afonseca, A Silva, A Ali, AC Pinto, AR Santos, AAMC Rocha, ... PloS one 6 (4), e18551, 2011 | 114 | 2011 |
Inside the Pan-genome-Methods and Software Overview L Carlos Guimaraes, L Benevides de Jesus, M Vinicius Canario Viana, ... Current Genomics 16 (4), 245-252, 2015 | 95 | 2015 |
Exoproteome and Secretome Derived Broad Spectrum Novel Drug and Vaccine Candidates in Vibrio cholerae Targeted by Piper betel Derived Compounds D Barh, N Barve, K Gupta, S Chandra, N Jain, S Tiwari, N Leon-Sicairos, ... PloS one 8 (1), e52773, 2013 | 91 | 2013 |
Comparative analysis of two complete Corynebacterium ulcerans genomes and detection of candidate virulence factors E Trost, A Al-Dilaimi, P Papavasiliou, J Schneider, P Viehoever, ... BMC genomics 12, 1-17, 2011 | 89 | 2011 |
PIPS: pathogenicity island prediction software SC Soares, VAC Abreu, RTJ Ramos, L Cerdeira, A Silva, J Baumbach, ... PloS one 7 (2), e30848, 2012 | 83 | 2012 |
Complete genome sequence of Corynebacterium pseudotuberculosis I19, a strain isolated from a cow in Israel with bovine mastitis A Silva, MPC Schneider, L Cerdeira, MS Barbosa, RTJ Ramos, ... Journal of bacteriology 193 (1), 323-324, 2011 | 66 | 2011 |
Genome Sequence of Exiguobacterium antarcticum B7, Isolated from a Biofilm in Ginger Lake, King George Island, Antarctica AR Carneiro, RTJ Ramos, H Dall'Agnol, AC Pinto, S de Castro Soares, ... Journal of Bacteriology 194 (23), 6689-6690, 2012 | 63 | 2012 |
Campylobacter fetus subspecies: Comparative genomics and prediction of potential virulence targets A Ali, SC Soares, AR Santos, LC Guimarães, E Barbosa, SS Almeida, ... Gene 508 (2), 145-156, 2012 | 61 | 2012 |
Genome sequence of Corynebacterium pseudotuberculosis biovar equi strain 258 and prediction of antigenic targets to improve biotechnological vaccine production SC Soares, E Trost, RTJ Ramos, AR Carneiro, AR Santos, AC Pinto, ... Journal of biotechnology 167 (2), 135-141, 2013 | 60 | 2013 |
New Insights into the Diversity of the Genus Faecalibacterium L Benevides, S Burman, R Martin, V Robert, M Thomas, S Miquel, F Chain, ... Frontiers in Microbiology 8, 1790, 2017 | 59 | 2017 |
Pan-Genome Analysis of Human Gastric Pathogen H. pylori: Comparative Genomics and Pathogenomics Approaches to Identify Regions Associated with Pathogenicity and Prediction of … A Ali, A Naz, SC Soares, M Bakhtiar, S Tiwari, SS Hassan, F Hanan, ... BioMed research international 2015, 2015 | 58 | 2015 |
A Novel Comparative Genomics Analysis for Common Drug and Vaccine Targets in Corynebacterium pseudotuberculosis and other CMN Group of Human Pathogens D Barh, N Jain, S Tiwari, BP Parida, V D’Afonseca, L Li, A Ali, AR Santos, ... Chemical biology & drug design 78 (1), 73-84, 2011 | 58 | 2011 |
An introduction of the role of probiotics in human infections and autoimmune diseases H Sales-Campos, SC Soares, CJF Oliveira Critical reviews in microbiology 45 (4), 413-432, 2019 | 55 | 2019 |
First Steps in the Analysis of Prokaryotic Pan-Genomes SS Costa, LC Guimarães, A Silva, SC Soares, RA Baraúna Bioinformatics and Biology Insights 14, 1177932220938064, 2020 | 50 | 2020 |
Analyses of the probiotic property and stress resistance-related genes of Lactococcus lactis subsp. lactis NCDO 2118 through comparative genomics and in vitro assays LC Oliveira, TDL Saraiva, WM Silva, UP Pereira, BC Campos, ... PLoS One 12 (4), e0175116, 2017 | 49 | 2017 |
An In Silico Identification of Common Putative Vaccine Candidates against Treponema pallidum: A Reverse Vaccinology and Subtractive Genomics Based Approach A Kumar Jaiswal, S Tiwari, SB Jamal, D Barh, V Azevedo, SC Soares International Journal of Molecular Sciences 18 (2), 402, 2017 | 45 | 2017 |