| IBS: an illustrator for the presentation and visualization of biological sequences W Liu, Y Xie, J Ma, X Luo, P Nie, Z Zuo, U Lahrmann, Q Zhao, Y Zheng, ... Bioinformatics 31 (20), 3359-3361, 2015 | 704 | 2015 |
| GPS-SUMO: a tool for the prediction of sumoylation sites and SUMO-interaction motifs Q Zhao, Y Xie, Y Zheng, S Jiang, W Liu, W Mu, Z Liu, Y Zhao, Y Xue, ... Nucleic acids research 42 (W1), W325-W330, 2014 | 447 | 2014 |
| MicroRNAs and complex diseases: from experimental results to computational models X Chen, D Xie, Q Zhao, ZH You Briefings in bioinformatics 20 (2), 515-539, 2019 | 415 | 2019 |
| BNPMDA: bipartite network projection for MiRNA–disease association prediction X Chen, D Xie, L Wang, Q Zhao, ZH You, H Liu Bioinformatics 34 (18), 3178-3186, 2018 | 259 | 2018 |
| EGBMMDA: extreme gradient boosting machine for MiRNA-disease association prediction X Chen, L Huang, D Xie, Q Zhao Cell death & disease 9 (1), 3, 2018 | 216 | 2018 |
| Excessive miR-25-3p maturation via N6-methyladenosine stimulated by cigarette smoke promotes pancreatic cancer progression J Zhang, R Bai, M Li, H Ye, C Wu, C Wang, S Li, L Tan, D Mai, G Li, L Pan, ... Nature communications 10 (1), 1858, 2019 | 209 | 2019 |
| CarcinoPred-EL: Novel models for predicting the carcinogenicity of chemicals using molecular fingerprints and ensemble learning methods L Zhang, H Ai, W Chen, Z Yin, H Hu, J Zhu, J Zhao, Q Zhao, H Liu Scientific reports 7 (1), 2118, 2017 | 138 | 2017 |
| GPS-Lipid: a robust tool for the prediction of multiple lipid modification sites Y Xie, Y Zheng, H Li, X Luo, Z He, S Cao, Y Shi, Q Zhao, Y Xue, Z Zuo, ... Scientific reports 6 (1), 28249, 2016 | 121 | 2016 |
| PIWI-interacting RNA-36712 restrains breast cancer progression and chemoresistance by interaction with SEPW1 pseudogene SEPW1P RNA L Tan, D Mai, B Zhang, X Jiang, J Zhang, R Bai, Y Ye, M Li, L Pan, J Su, ... Molecular cancer 18, 1-15, 2019 | 120 | 2019 |
| PIWI-interacting RNA-54265 is oncogenic and a potential therapeutic target in colorectal adenocarcinoma D Mai, P Ding, L Tan, J Zhang, Z Pan, R Bai, C Li, M Li, Y Zhou, W Tan, ... Theranostics 8 (19), 5213, 2018 | 94 | 2018 |
| Systematic analysis of the aberrances and functional implications of ferroptosis in cancer Z Liu, Q Zhao, ZX Zuo, SQ Yuan, K Yu, Q Zhang, X Zhang, H Sheng, ... Iscience 23 (7), 101302, 2020 | 93 | 2020 |
| Predicting lncRNA–miRNA interactions based on logistic matrix factorization with neighborhood regularized H Liu, G Ren, H Chen, Q Liu, Y Yang, Q Zhao Knowledge-Based Systems 191, 105261, 2020 | 90 | 2020 |
| HLPI-ensemble: prediction of human lncRNA-protein interactions based on ensemble strategy H Hu, L Zhang, H Ai, H Zhang, Y Fan, Q Zhao, H Liu RNA biology 15 (6), 797-806, 2018 | 88 | 2018 |
| Circular RNAs and complex diseases: from experimental results to computational models CC Wang, CD Han, Q Zhao, X Chen Briefings in bioinformatics 22 (6), bbab286, 2021 | 85 | 2021 |
| The miR-545/374a Cluster Encoded in the Ftx lncRNA is Overexpressed in HBV-Related Hepatocellular Carcinoma and Promotes Tumorigenesis and Tumor … Q Zhao, T Li, J Qi, J Liu, C Qin PloS one 9 (10), e109782, 2014 | 83 | 2014 |
| RMVar: an updated database of functional variants involved in RNA modifications X Luo, H Li, J Liang, Q Zhao, Y Xie, J Ren, Z Zuo Nucleic acids research 49 (D1), D1405-D1412, 2021 | 82 | 2021 |
| IRWNRLPI: integrating random walk and neighborhood regularized logistic matrix factorization for lncRNA-protein interaction prediction Q Zhao, Y Zhang, H Hu, G Ren, W Zhang, H Liu Frontiers in genetics 9, 239, 2018 | 78 | 2018 |
| Using network distance analysis to predict lncRNA–miRNA interactions L Zhang, P Yang, H Feng, Q Zhao, H Liu Interdisciplinary Sciences: Computational Life Sciences 13, 535-545, 2021 | 72 | 2021 |
| Integrating bipartite network projection and KATZ measure to identify novel CircRNA-disease associations Q Zhao, Y Yang, G Ren, E Ge, C Fan IEEE transactions on nanobioscience 18 (4), 578-584, 2019 | 68 | 2019 |
| The bipartite network projection-recommended algorithm for predicting long non-coding RNA-protein interactions Q Zhao, H Yu, Z Ming, H Hu, G Ren, H Liu Molecular Therapy-Nucleic Acids 13, 464-471, 2018 | 63 | 2018 |
