New methodologies for ligand-based virtual screening

FL Stahura, J Bajorath - Current pharmaceutical design, 2005 - ingentaconnect.com
Computational screening of compound databases has become increasingly popular in
pharmaceutical research. Virtual screening approaches can roughly be divided into target …

Performance of machine learning methods for ligand-based virtual screening

D Plewczynski, SAH Spieser… - Combinatorial chemistry & …, 2009 - ingentaconnect.com
Computational screening of compound databases has become increasingly popular in
pharmaceutical research. This review focuses on the evaluation of ligand-based virtual …

Quo vadis, virtual screening? A comprehensive survey of prospective applications

P Ripphausen, B Nisius, L Peltason… - Journal of medicinal …, 2010 - ACS Publications
Virtual screening (VSa) of compound databases has become a popular hit identification
technique and a major playground for computational method development. 1 Relevant …

Considerations in compound database preparation “Hidden” impact on virtual screening results

AJS Knox, MJ Meegan, G Carta… - Journal of chemical …, 2005 - ACS Publications
Structure-based virtual screening (SBVS) utilizing docking algorithms has become an
essential tool in the drug discovery process, and significant progress has been made in …

Virtual screening: a fast tool for drug design

V Vyas, A Jain, A Jain, A Gupta - Scientia Pharmaceutica, 2008 - mdpi.com
Computational screening of databases has become increasingly popular in the
pharmaceutical research. Virtual screening uses computer based methods to discover new …

Ligand-based structural hypotheses for virtual screening

AN Jain - Journal of medicinal chemistry, 2004 - ACS Publications
The majority of drug targets for small molecule therapeutics are proteins whose three-
dimensional structure is not known to sufficient resolution to permit structure-based design …

Structure-based virtual ligand screening: recent success stories

BO Villoutreix, R Eudes… - Combinatorial chemistry & …, 2009 - ingentaconnect.com
Today, computational methods are commonly used in all areas of health science research.
Among these methods, virtual ligand screening has become an established technique for hit …

State-of-the-art in ligand-based virtual screening

P Ripphausen, B Nisius, J Bajorath - Drug discovery today, 2011 - Elsevier
Virtual screening is a much discussed topic in chemoinformatics and medicinal chemistry,
and widely applied in pharmaceutical research. Here, we provide an in-depth analysis of …

Novel technologies for virtual screening

T Lengauer, C Lemmen, M Rarey, M Zimmermann - Drug discovery today, 2004 - Elsevier
There are several methods for virtual screening of databases of small organic compounds to
find tight binders to a given protein target. Recent reviews in Drug Discovery Today have …

Comparison of structure‐and ligand‐based virtual screening protocols considering hit list complementarity and enrichment factors

DM Krüger, A Evers - ChemMedChem: Chemistry Enabling …, 2010 - Wiley Online Library
Abstract Structure‐and ligand‐based virtual‐screening methods (docking, 2D‐and 3D‐
similarity searching) were analysed for their effectiveness in virtual screening against four …