Structure-based virtual screening protocols.

A Good - Current opinion in drug discovery & development, 2001 - europepmc.org
Virtual screening techniques continue to play an important role within the pharmaceutical
industry lead discovery process. A core element of these technologies encompasses the …

Virtual ligand screening: strategies, perspectives and limitations

G Klebe - Drug discovery today, 2006 - Elsevier
In contrast to high-throughput screening, in virtual ligand screening (VS), compounds are
selected using computer programs to predict their binding to a target receptor. A key …

Novel technologies for virtual screening

T Lengauer, C Lemmen, M Rarey, M Zimmermann - Drug discovery today, 2004 - Elsevier
There are several methods for virtual screening of databases of small organic compounds to
find tight binders to a given protein target. Recent reviews in Drug Discovery Today have …

[PDF][PDF] Virtual screening strategies in drug design–methods and applications

E Bielska, X Lucas, A Czerwoniec, JM Kasprzak… - …, 2011 - journals.pan.pl
Virtual screening (VS) overcomes the limitations of traditional high-throughput screening
(HTS) by applying computer-based methods in drug discovery. VS takes advantage of fast …

Overview of methods and strategies for conducting virtual small molecule screening

X Fradera, K Babaoglu - Current protocols in chemical biology, 2017 - Wiley Online Library
Virtual screening (VS) in the context of drug discovery is the use of computational methods
to discover novel ligands with a desired biological activity from within a larger collection of …

Analysis and optimization of structure-based virtual screening protocols: 2. Examination of docked ligand orientation sampling methodology: mapping a …

AC Good, DL Cheney, DF Sitkoff, JS Tokarski… - Journal of Molecular …, 2003 - Elsevier
An important element of any structure-based virtual screening (SVS) technique is the
method used to orient the ligands in the target active site. This has been a somewhat …

Virtual screening strategies in drug discovery: a critical review

A Lavecchia, C Di Giovanni - Current medicinal chemistry, 2013 - ingentaconnect.com
Virtual screening (VS) is a powerful technique for identifying hit molecules as starting points
for medicinal chemistry. The number of methods and softwares which use the ligand and …

Analysis and optimization of structure-based virtual screening protocols (1): exploration of ligand conformational sampling techniques

AC Good, DL Cheney - Journal of Molecular Graphics and Modelling, 2003 - Elsevier
Ligand conformational flexibility has long been recognized as an important issue in virtual
screening (VS). To this end, a number of different methodologies have been adapted to …

Combining ligand-based and structure-based drug design in the virtual screening arena

S Moro, M Bacilieri, F Deflorian - Expert Opinion on Drug Discovery, 2007 - Taylor & Francis
The aim of virtual high-throughput screening is the identification of biologically relevant
molecules among either tangible or virtual (large) collections of compounds. Likewise, high …

Virtual screening

I Muegge, S Oloff - Burger's Medicinal Chemistry and Drug …, 2003 - Wiley Online Library
Virtual screening can be considered as in silico analog to high‐throughput screening. It is a
knowledge‐driven approach toward finding new lead structures for drug discovery. There …