Evaluation of different machine learning methods for ligand-based virtual screening
In silico High Throughput Screening of large compound databases has become increasingly
popular technology of finding valuable drug candidates, by applying a wide range of …
popular technology of finding valuable drug candidates, by applying a wide range of …
[PDF][PDF] Ligand-based virtual screening using fuzzy correlation coefficient
Selection and identification of a subset of compounds from libraries or databases, which are
likely to possess a desired biological activity is the main target of ligand-based virtual …
likely to possess a desired biological activity is the main target of ligand-based virtual …
Virtual screening applications: a study of ligand-based methods and different structure representations in four different scenarios
DP Hristozov, TI Oprea, J Gasteiger - Journal of computer-aided molecular …, 2007 - Springer
Four different ligand-based virtual screening scenarios are studied:(1) prioritizing
compounds for subsequent high-throughput screening (HTS);(2) selecting a predefined …
compounds for subsequent high-throughput screening (HTS);(2) selecting a predefined …
New methodologies for ligand-based virtual screening
FL Stahura, J Bajorath - Current pharmaceutical design, 2005 - ingentaconnect.com
Computational screening of compound databases has become increasingly popular in
pharmaceutical research. Virtual screening approaches can roughly be divided into target …
pharmaceutical research. Virtual screening approaches can roughly be divided into target …
Benchmarking data sets for the evaluation of virtual ligand screening methods: review and perspectives
Virtual screening methods are commonly used nowadays in drug discovery processes.
However, to ensure their reliability, they have to be carefully evaluated. The evaluation of …
However, to ensure their reliability, they have to be carefully evaluated. The evaluation of …
Machine learning in virtual screening
In this review, we highlight recent applications of machine learning to virtual screening,
focusing on the use of supervised techniques to train statistical learning algorithms to …
focusing on the use of supervised techniques to train statistical learning algorithms to …
Virtual screening data fusion using both structure-and ligand-based methods
F Svensson, A Karlén, C Sköld - Journal of chemical information …, 2012 - ACS Publications
Virtual screening is widely applied in drug discovery, and significant effort has been put into
improving current methods. In this study, we have evaluated the performance of compound …
improving current methods. In this study, we have evaluated the performance of compound …
SABRE: ligand/structure-based virtual screening approach using consensus molecular-shape pattern recognition
NN Wei, A Hamza - 2014 - ACS Publications
We present an efficient and rational ligand/structure shape-based virtual screening
approach combining our previous ligand shape-based similarity SABRE (shape-approach …
approach combining our previous ligand shape-based similarity SABRE (shape-approach …
Application of the weighted Power-Weakness Ratio (wPWR) as a fusion rule in ligand-based virtual screening
Similarity searching, a technique used for ligand-based virtual screening in drug discovery,
exploits the structural information of known active compounds to find new ones with the …
exploits the structural information of known active compounds to find new ones with the …
REPROVIS-DB: a benchmark system for ligand-based virtual screening derived from reproducible prospective applications
P Ripphausen, AM Wassermann… - Journal of chemical …, 2011 - ACS Publications
Benchmark calculations are essential for the evaluation of virtual screening (VS) methods.
Typically, classes of known active compounds taken from the medicinal chemistry literature …
Typically, classes of known active compounds taken from the medicinal chemistry literature …