Virtual screening: a fast tool for drug design

V Vyas, A Jain, A Jain, A Gupta - Scientia Pharmaceutica, 2008 - mdpi.com
Computational screening of databases has become increasingly popular in the
pharmaceutical research. Virtual screening uses computer based methods to discover new …

New methodologies for ligand-based virtual screening

FL Stahura, J Bajorath - Current pharmaceutical design, 2005 - ingentaconnect.com
Computational screening of compound databases has become increasingly popular in
pharmaceutical research. Virtual screening approaches can roughly be divided into target …

Docking-based virtual screening: recent developments

T Tuccinardi - Combinatorial chemistry & high throughput …, 2009 - ingentaconnect.com
Virtual (database) screening (VS) of molecules promises to accelerate the discovery of new
drugs and reduce costs by identifying molecules with high probabilities of binding to a target …

Comparative performance of several flexible docking programs and scoring functions: enrichment studies for a diverse set of pharmaceutically relevant targets

Z Zhou, AK Felts, RA Friesner… - Journal of chemical …, 2007 - ACS Publications
Virtual screening by molecular docking has become a widely used approach to lead
discovery in the pharmaceutical industry when a high-resolution structure of the biological …

Novel technologies for virtual screening

T Lengauer, C Lemmen, M Rarey, M Zimmermann - Drug discovery today, 2004 - Elsevier
There are several methods for virtual screening of databases of small organic compounds to
find tight binders to a given protein target. Recent reviews in Drug Discovery Today have …

BEAR, a novel virtual screening methodology for drug discovery

G Degliesposti, C Portioli… - Journal of …, 2011 - journals.sagepub.com
BEAR (binding estimation after refinement) is a new virtual screening technology based on
the conformational refinement of docking poses through molecular dynamics and prediction …

Virtual screening in drug discovery-a computational perspective

AS Reddy, SP Pati, PP Kumar… - Current Protein and …, 2007 - ingentaconnect.com
Virtual screening emerged as an important tool in our quest to access novel drug like
compounds. There are a wide range of comparable and contrasting methodological …

Multiple structures for virtual ligand screening: defining binding site properties-based criteria to optimize the selection of the query

N Ben Nasr, H Guillemain, N Lagarde… - Journal of chemical …, 2013 - ACS Publications
Structure based virtual ligand screening (SBVLS) methods are widely used in drug
discovery programs. When several structures of the target are available, protocols based …

Reliability analysis and optimization of the consensus docking approach for the development of virtual screening studies

G Poli, A Martinelli, T Tuccinardi - Journal of Enzyme Inhibition and …, 2016 - Taylor & Francis
Ligand-protein docking is one of the most common techniques used in virtual screening
campaigns. Despite the large number of docking software available, there is still the need of …

Virtual screening of drugs: score functions, docking, and drug design

A Breda, LA Basso, DS Santos… - … -Aided Drug Design, 2008 - ingentaconnect.com
The computational approach for new drug design and/or identification, was initially
proposed in mid 70's. The virtual screening of chemical libraries against a biological target …