Similarity‐based virtual screening with a Bayesian inference network

A Abdo, N Salim - ChemMedChem: Chemistry Enabling Drug …, 2009 - Wiley Online Library
… of probabilistic networks known as Bayesian inference network (BIN). A Bayesian network is
… BINs are also known as “belief networks”, “causal probabilistic networks” “casual nets” and “…

Evaluation of a Bayesian inference network for ligand-based virtual screening

B Chen, C Mueller, P Willett - Journal of cheminformatics, 2009 - Springer
… use of Bayesian inference networks for the implementation of similarity-based virtual screening.
Our … databases show that the networks provide an effective tool for ligand-based virtual

wSDTNBI: a novel network-based inference method for virtual screening

Z Wu, H Ma, Z Liu, L Zheng, Z Yu, S Cao, W Fang… - Chemical …, 2022 - pubs.rsc.org
… In recent years, the rapid development of network-based methods for the … of virtual screening
(VS), namely, network-based VS. Herein, we reported a novel network-based inference

Ligand‐Based Virtual Screening Using Bayesian Inference Network and Reweighted Fragments

A Ahmed, A Abdo, N Salim - The Scientific World Journal, 2012 - Wiley Online Library
… use of Bayesian networks as an alternative to existing tools for similarity-based virtual
screening. In our recent work, the retrieval performance of the Bayesian inference network (BIN) …

Implementing relevance feedback in ligand-based virtual screening using Bayesian inference network

A Abdo, N Salim, A Ahmed - … of biomolecular screening, 2011 - journals.sagepub.com
… authors enhance the Bayesian inference network (BIN) using … Simulated virtual screening
experiments with three MDL … of ligand-based virtual screening searches, especially for higher …

New fragment weighting scheme for the bayesian inference network in ligand-based virtual screening

A Abdo, N Salim - Journal of chemical information and modeling, 2011 - ACS Publications
… In this paper, we focus on the Bayesian inference network (BIN) model, which models
molecules and reference structures as probabilistic inference networks. BINs were originally …

Ligand-based virtual screening using bayesian networks

A Abdo, B Chen, C Mueller, N Salim… - Journal of chemical …, 2010 - ACS Publications
inference network (BIN) provides an interesting alternative to existing tools for similarity-based
virtual screening. … form of Bayesian network for similarity-based virtual screening that has …

Similarity‐Based Virtual Screening Using Bayesian Inference Network: Enhanced Search Using 2D Fingerprints and Multiple Reference Structures

A Abdo, N Salim - QSAR & Combinatorial Science, 2009 - Wiley Online Library
inference network (BIN) model is that permits the combining of multiple reference structures.
In this paper we introduce a formal inference net … The inference net model of similarity, which …

Ligand-based virtual screening using Bayesian inference network

A Abdo, N Salim - … design, search methods, and applications of …, 2011 - ACS Publications
… In this work we report the use of BIN for ligand-based virtual screening when a … inference
network provides an interesting alternative to existing tools for ligand-based virtual screening

An enhancement of Bayesian inference network for ligand-based virtual screening using minifingerprints

A Ahmed, A Abdo, N Salim - Fourth International Conference …, 2012 - spiedigitallibrary.org
… In this study we enhanced the screening effectiveness of Bayesian inference network using
short binary bit strings. In this approach the “Minifingerprints” MFPs were designed based on …