[PDF][PDF] The importance of different spatial scales in determining structure and function of deep-sea infauna communities

J Ingels, A Vanreusel - Biogeosciences Discuss, 2013 - pdfs.semanticscholar.org
The urge to understand spatial distributions of species and communities and their causative
processes has continuously instigated the development and testing of conceptual models in …

Deciphering diversity and ecological function from marine metagenomes

HM Bik - The Biological Bulletin, 2014 - journals.uchicago.edu
Metagenomic sequencing now represents a common, powerful approach for investigating
diversity and functional relationships in marine ecosystems. High-throughput datasets …

[HTML][HTML] Metagenomics to characterize sediment microbial biodiversity associated with fishing exposure within the Stellwagen Bank National Marine Sanctuary

SA Bruce, SA Aytur, CP Andam, JP Bucci - Scientific Reports, 2022 - nature.com
Microbes in marine sediments constitute a large percentage of the global marine ecosystem
and function to maintain a healthy food web. In continental shelf habitats such as the Gulf of …

Unravelling the environmental drivers of deep-sea nematode biodiversity and its relation with carbon mineralisation along a longitudinal primary productivity gradient

E Pape, TN Bezerra, DOB Jones, A Vanreusel - Biogeosciences, 2013 - bg.copernicus.org
Alongside a primary productivity gradient between the Galicia Bank region in the Northeast
Atlantic and the more oligotrophic eastern Mediterranean Basin, we investigated the …

Benthic microbial biogeographic trends in the North Sea are shaped by an interplay of environmental drivers and bottom trawling effort

G Bonthond, J Beermann, L Gutow… - ISME …, 2023 - academic.oup.com
Microbial composition and diversity in marine sediments are shaped by environmental,
biological, and anthropogenic processes operating at different scales. However, our …

A nitrifier‐enriched microbial community contributes to the degradation of environmental DNA

RE Beattie, CC Helbing, JJ Imbery… - Environmental …, 2023 - Wiley Online Library
Environmental DNA (eDNA) surveys are a promising alternative to traditional monitoring of
invasive species, rare species, and biodiversity. Detecting organism‐specific eDNA reduces …

Environmental DNA captures diurnal fluctuations of surface eukaryotes on a tropical coral reef

R Dowell, N Dunn, C Head, C Yesson… - Environmental …, 2024 - Wiley Online Library
Environmental DNA (eDNA) metabarcoding has been widely employed to describe
biological communities in the marine environment and to compare the richness and diversity …

Bacterial communities' taxonomic and functional turnovers both accurately predict marine benthic ecological quality status

T Cordier - Environmental Dna, 2020 - Wiley Online Library
The acquisition of biodiversity data is of prime importance to perform an efficient ecosystem
management and ensure the sustainable provisioning of marine ecosystem services …

Improved freshwater macroinvertebrate detection from environmental DNA through minimized nontarget amplification

F Leese, M Sander, D Buchner, V Elbrecht… - Environmental …, 2021 - Wiley Online Library
DNA metabarcoding of freshwater communities typically relies on PCR amplification of a
fragment of the mitochondrial cytochrome c oxidase I (COI) gene with degenerate primers …

Vertical distribution of metabolically active eukaryotes in the water column and sediments of the Black Sea

MJL Coolen, G Shtereva - FEMS microbiology ecology, 2009 - academic.oup.com
Recent DNA-based phylogenetic studies have reported high eukaryotal diversities in a wide
range of settings including samples obtained from anoxic environments. However, parallel …