RNA outperforms DNA-based metabarcoding in assessing the diversity and response of microeukaryotes to environmental variables in the Arctic Ocean

H Kong, EJ Yang, N Jiao, Y Lee, J Jung, KH Cho… - Science of the Total …, 2023 - Elsevier
Abstract The Arctic Ocean (AO) has a harsh environment characterized by low temperatures,
extensive ice coverage, and periodic freezing and melting of sea ice, which has provided …

[HTML][HTML] Comparative metabarcoding and metatranscriptomic analysis of microeukaryotes within coastal surface waters of West Greenland and Northwest Iceland

S Elferink, S Wohlrab, S Neuhaus… - Frontiers in Marine …, 2020 - frontiersin.org
Climate change alters environmental conditions that are expected to have a profound effect
on the biodiversity, community composition, and metabolic processes of microeukaryotic …

[HTML][HTML] Microbial eukaryotes in an Arctic under-ice spring bloom North of Svalbard

AR Meshram, A Vader, S Kristiansen… - Frontiers in …, 2017 - frontiersin.org
Microbial eukaryotes can play prominent roles in the Arctic marine ecosystem, but their
diversity and variability is not well known in the ice-covered ecosystems. We determined the …

[HTML][HTML] The diversity and biogeography of microeukaryotes in the euphotic zone of the northwestern Pacific Ocean

PF Wu, DX Li, LF Kong, YY Li, H Zhang, ZX Xie… - Science of the Total …, 2020 - Elsevier
Microeukaryotes are the key ecosystem drivers mediating marine productivity, the food web
and biogeochemical cycles. The northwestern Pacific Ocean (NWPO), as one of the world's …

Biogeographical and biodiversity patterns of planktonic microeukaryotes along the tropical western to eastern Pacific Ocean transect revealed by metabarcoding

Y Fu, Z Qu, Y Wang, P Sun, N Jiao, D Xu - Microbiology Spectrum, 2024 - Am Soc Microbiol
ABSTRACT Microeukaryotic plankton (0.2–200 µm), which are morphologically and
genetically highly diverse, play a crucial role in ocean productivity and carbon consumption …

[HTML][HTML] A comparison of two gene regions for assessing community composition of eukaryotic marine microalgae from coastal ecosystems

J Stuart, KG Ryan, JK Pearman, J Thomson-Laing… - Scientific Reports, 2024 - nature.com
Two gene regions commonly used to characterise the diversity of eukaryotic communities
using metabarcoding are the 18S ribosomal DNA V4 and V9 gene regions. We assessed …

Exploration of the types of rarity in the arctic ocean from the perspective of multiple methodologies

F Pascoal, R Costa, P Assmy, P Duarte, C Magalhães - Microbial ecology, 2021 - Springer
Abstract The Arctic Ocean is facing rapid environmental changes with cascading effects on
the entire Arctic marine ecosystem. However, we have a limited understanding of the …

Exploring bacterial diversity in Arctic fjord sediments: a 16S rRNA–based metabarcoding portrait

B Kachiprath, S Solomon, J Gopi… - Brazilian Journal of …, 2024 - Springer
The frosty polar environment houses diverse habitats mostly driven by psychrophilic and
psychrotolerant microbes. Along with traditional cultivation methods, next-generation …

Metabarcoding reveals environmental factors influencing spatio‐temporal variation in pelagic micro‐eukaryotes

PM Brannock, AC Ortmann, AG Moss… - Molecular …, 2016 - Wiley Online Library
Marine environments harbour a vast diversity of micro‐eukaryotic organisms (protists and
other small eukaryotes) that play important roles in structuring marine ecosystems. However …

[HTML][HTML] Environmental barcoding reveals massive dinoflagellate diversity in marine environments

RF Stern, A Horak, RL Andrew, MA Coffroth… - PloS one, 2010 - journals.plos.org
Background Dinoflagellates are an ecologically important group of protists with important
functions as primary producers, coral symbionts and in toxic red tides. Although widely …