[HTML][HTML] An assessment of environmental metabarcoding protocols aiming at favoring contemporary biodiversity in inventories of deep-sea communities
The abyssal seafloor covers more than 50% of planet Earth and is a large reservoir of still
mostly undescribed biodiversity. It is increasingly targeted by resource-extraction industries …
mostly undescribed biodiversity. It is increasingly targeted by resource-extraction industries …
Environmental DNA metabarcoding studies are critically affected by substrate selection
Effective biomonitoring is critical for driving management outcomes that ensure long‐term
sustainability of the marine environment. In recent years, environmental DNA (eDNA) …
sustainability of the marine environment. In recent years, environmental DNA (eDNA) …
[HTML][HTML] Environmental DNA metabarcoding for benthic monitoring: A review of sediment sampling and DNA extraction methods
J Pawlowski, K Bruce, K Panksep, FI Aguirre… - Science of the Total …, 2022 - Elsevier
Environmental DNA (eDNA) metabarcoding (parallel sequencing of DNA/RNA for
identification of whole communities within a targeted group) is revolutionizing the field of …
identification of whole communities within a targeted group) is revolutionizing the field of …
[HTML][HTML] Environmental RNA as a tool for marine community biodiversity assessments
Microscopic organisms are often overlooked in traditional diversity assessments due to the
difficulty of identifying them based on morphology. Metabarcoding is a method for rapidly …
difficulty of identifying them based on morphology. Metabarcoding is a method for rapidly …
Species‐level biodiversity assessment using marine environmental DNA metabarcoding requires protocol optimization and standardization
DNA extraction from environmental samples (environmental DNA; eDNA) for metabarcoding‐
based biodiversity studies is gaining popularity as a noninvasive, time‐efficient, and cost …
based biodiversity studies is gaining popularity as a noninvasive, time‐efficient, and cost …
Capture by hybridization for full‐length barcode‐based eukaryotic and prokaryotic biodiversity inventories of deep sea ecosystems
B Günther, S Marre, C Defois, T Merzi… - Molecular Ecology …, 2022 - Wiley Online Library
Biodiversity inventory of marine systems remains limited due to unbalanced access to the
three ocean dimensions. The use of environmental DNA (eDNA) for metabarcoding allows …
three ocean dimensions. The use of environmental DNA (eDNA) for metabarcoding allows …
[HTML][HTML] Evaluating sediment and water sampling methods for the estimation of deep-sea biodiversity using environmental DNA
Despite representing one of the largest biomes on earth, biodiversity of the deep seafloor is
still poorly known. Environmental DNA metabarcoding offers prospects for fast inventories …
still poorly known. Environmental DNA metabarcoding offers prospects for fast inventories …
[HTML][HTML] Detection of introduced and resident marine species using environmental DNA metabarcoding of sediment and water
Environmental DNA (eDNA) surveys are increasingly being used for biodiversity monitoring,
principally because they are sensitive and can provide high resolution community …
principally because they are sensitive and can provide high resolution community …
[HTML][HTML] Combining multiple markers in environmental DNA metabarcoding to assess deep-sea benthic biodiversity
J Liu, H Zhang - Frontiers in Marine Science, 2021 - frontiersin.org
Environmental DNA (eDNA) metabarcoding is an emerging tool to estimate diversity by
combining DNA from the environmental samples and the high-throughput sequencing …
combining DNA from the environmental samples and the high-throughput sequencing …
[HTML][HTML] Ecosystem biomonitoring with eDNA: metabarcoding across the tree of life in a tropical marine environment
Effective marine management requires comprehensive data on the status of marine
biodiversity. However, efficient methods that can document biodiversity in our oceans are …
biodiversity. However, efficient methods that can document biodiversity in our oceans are …