CRISPR/Cas9‐Based Counterselection Boosts Recombineering Efficiency in Pseudomonas putida

T Aparicio, V de Lorenzo… - Biotechnology …, 2018 - Wiley Online Library
While adoption of single‐stranded DNA recombineering techniques has greatly eased
genetic design of the platform strain Pseudomonas putida KT2440, available methods still …

CRISPR/Cas9‐enhanced ssDNA recombineering for Pseudomonas putida

T Aparicio, V de Lorenzo… - Microbial …, 2019 - Wiley Online Library
Implementation of single‐stranded DNA (ss DNA) recombineering in Pseudomonas putida
has widened the range of genetic manipulations applicable to this biotechnologically …

Accelerated genome engineering of Pseudomonas putida by I‐SceI―mediated recombination and CRISPR‐Cas9 counterselection

NT Wirth, E Kozaeva, PI Nikel - Microbial Biotechnology, 2020 - Wiley Online Library
Pseudomonas species have become reliable platforms for bioproduction due to their
capability to tolerate harsh conditions imposed by large‐scale bioprocesses and their …

An expanded CRISPR–Cas9-assisted recombineering toolkit for engineering genetically intractable Pseudomonas aeruginosa isolates

D Pankratz, NO Gomez, A Nielsen, A Mustafayeva… - Nature protocols, 2023 - nature.com
Much of our current understanding of microbiology is based on the application of genetic
engineering procedures. Since their inception (more than 30 years ago), methods based …

Modular (de) construction of complex bacterial phenotypes by CRISPR/nCas9-assisted, multiplex cytidine base-editing

DC Volke, RA Martino, E Kozaeva, AM Smania… - Nature …, 2022 - nature.com
CRISPR/Cas technologies constitute a powerful tool for genome engineering, yet their use
in non-traditional bacteria depends on host factors or exogenous recombinases, which limits …

Coupling the CRISPR/Cas9 system with lambda red recombineering enables simplified chromosomal gene replacement in Escherichia coli

ME Pyne, M Moo-Young, DA Chung… - Applied and …, 2015 - Am Soc Microbiol
To date, most genetic engineering approaches coupling the type II Streptococcus pyogenes
clustered regularly interspaced short palindromic repeat (CRISPR)/Cas9 system to lambda …

Bacterial genetic engineering by means of recombineering for reverse genetics

U Fels, K Gevaert, P Van Damme - Frontiers in Microbiology, 2020 - frontiersin.org
Serving a robust platform for reverse genetics enabling the in vivo study of gene functions
primarily in enterobacteriaceae, recombineering-or recombination-mediated genetic …

[HTML][HTML] Fundamental CRISPR-Cas9 tools and current applications in microbial systems

P Tian, J Wang, X Shen, JF Rey, Q Yuan… - Synthetic and systems …, 2017 - Elsevier
Derived from the bacterial adaptive immune system, CRISPR technology has revolutionized
conventional genetic engineering methods and unprecedentedly facilitated strain …

CRISPR-Cas12a-assisted recombineering in bacteria

MY Yan, HQ Yan, GX Ren, JP Zhao… - Applied and …, 2017 - Am Soc Microbiol
Clustered regularly interspaced short palindromic repeat (CRISPR)-Cas12a (Cpf1) has
emerged as an effective genome editing tool in many organisms. Here, we developed and …

CRISPR RNA-guided integrases for high-efficiency, multiplexed bacterial genome engineering

PLH Vo, C Ronda, SE Klompe, EE Chen, C Acree… - Nature …, 2021 - nature.com
Existing technologies for site-specific integration of kilobase-sized DNA sequences in
bacteria are limited by low efficiency, a reliance on recombination, the need for multiple …