Bioactive compounds synthesized by non-ribosomal peptide synthetases and type-I polyketide synthases discovered through genome-mining and metagenomics

K Nikolouli, D Mossialos - Biotechnology letters, 2012 - Springer
Non-ribosomal peptide synthetases (NRPS) and type-I polyketide synthases (PKS-I) are
multimodular enzymes involved in biosynthesis of oligopeptide and polyketide secondary …

Polyketide synthases and nonribosomal peptide synthetases: the emerging view from bacterial genomics

S Donadio, P Monciardini, M Sosio - Natural product reports, 2007 - pubs.rsc.org
Covering: bacterial genome sequences to 2005 and post-genomic literature to June 2006 A
total of 223 complete bacterial genomes are analyzed, with 281 citations, for the presence of …

[HTML][HTML] Discovery strategies of bioactive compounds synthesized by nonribosomal peptide synthetases and type-I polyketide synthases derived from marine …

GD Amoutzias, A Chaliotis, D Mossialos - Marine drugs, 2016 - mdpi.com
Considering that 70% of our planet's surface is covered by oceans, it is likely that
undiscovered biodiversity is still enormous. A large portion of marine biodiversity consists of …

Non-ribosomal peptide synthetases: Identifying the cryptic gene clusters and decoding the natural product

M Singh, S Chaudhary, D Sareen - Journal of biosciences, 2017 - Springer
Non-ribosomal peptide synthetases (NRPSs) and polyketide synthases (PKSs) present in
bacteria and fungi are the major multi-modular enzyme complexes which synthesize …

ClusterMine360: a database of microbial PKS/NRPS biosynthesis

KR Conway, CN Boddy - Nucleic acids research, 2012 - academic.oup.com
Abstract ClusterMine360 (http://www. clustermine360. ca/) is a database of microbial
polyketide and non-ribosomal peptide gene clusters. It takes advantage of crowd-sourcing …

Exploration and exploitation of the environment for novel specialized metabolites

C Loureiro, MH Medema, J van der Oost… - Current opinion in …, 2018 - Elsevier
Highlights•Environments that are most promising sources of new bioactives were
identified.•New computational sequence binning tools improve large gene cluster …

Bioinformatics tools for genome mining of polyketide and non-ribosomal peptides

CN Boddy - Journal of Industrial Microbiology and Biotechnology, 2014 - academic.oup.com
Microbial natural products have played a key role in the development of clinical agents in
nearly all therapeutic areas. Recent advances in genome sequencing have revealed that …

CLUSEAN: a computer-based framework for the automated analysis of bacterial secondary metabolite biosynthetic gene clusters

T Weber, C Rausch, P Lopez, I Hoof, V Gaykova… - Journal of …, 2009 - Elsevier
Bacterial secondary metabolites are an important source of antimicrobial and cytostatic
drugs. These molecules are often synthesized in a stepwise fashion by multimodular …

Multiple hybrid polyketide synthase/non-ribosomal peptide synthetase gene clusters in the myxobacterium Stigmatella aurantiaca

B Silakowski, B Kunze, R Müller - Gene, 2001 - Elsevier
Many bacterial and fungal secondary metabolites are produced by polyketide synthases
(PKS) and non-ribosomal peptide synthetases (NRPS). Recently, it has been discovered …

Proteomics-based discovery of koranimine, a cyclic imine natural product

BS Evans, I Ntai, Y Chen, SJ Robinson… - Journal of the …, 2011 - ACS Publications
Nonribosomal peptide synthetases (NRPSs) and polyketide synthases (PKSs) are large
enzymes responsible for the biosynthesis of medically and ecologically important secondary …