Polyketide synthases and nonribosomal peptide synthetases: the emerging view from bacterial genomics
… on occurrence and role of TMS genes in the published bacterial genome sequences. For
these reasons, we surveyed bacterial genomes for the presence of TMS genes using either the …
these reasons, we surveyed bacterial genomes for the presence of TMS genes using either the …
Evolutionary implications of bacterial polyketide synthases
H Jenke-Kodama, A Sandmann… - Molecular biology …, 2005 - academic.oup.com
… the microbial genomes that are completely available including those that currently cannot be
assigned to a polyketide … We could detect PKS I genes in 27 of the 138 bacterial genomes …
assigned to a polyketide … We could detect PKS I genes in 27 of the 138 bacterial genomes …
Evolution of metabolic diversity: insights from microbial polyketide synthases
H Jenke-Kodama, E Dittmann - Phytochemistry, 2009 - Elsevier
… To further focus the analysis on a third level, we have analyzed the diversification of PKS in
a single bacterial genome. Here, we shortly summarize the results of our studies and discuss …
a single bacterial genome. Here, we shortly summarize the results of our studies and discuss …
The impact of bacterial genomics on natural product research
HB Bode, R Müller - Angewandte Chemie International Edition, 2005 - Wiley Online Library
… This Review describes the impact of microbial genomics on natural products research, in …
systems called polyketide synthases (PKSs) and nonribosomal peptide synthetases (NRPSs), …
systems called polyketide synthases (PKSs) and nonribosomal peptide synthetases (NRPSs), …
Comprehensive analysis of distinctive polyketide and nonribosomal peptide structural motifs encoded in microbial genomes
Y Minowa, M Araki, M Kanehisa - Journal of molecular biology, 2007 - Elsevier
… polyketide (PK) and nonribosomal peptide (NRP) structures encoded in microbial genomes…
PKs/NRPs are polymers of carbonyl/peptidyl chains synthesized by polyketide synthases (…
PKs/NRPs are polymers of carbonyl/peptidyl chains synthesized by polyketide synthases (…
Widespread occurrence and genomic context of unusually small polyketide synthase genes in microbial consortia associated with marine sponges
L Fieseler, U Hentschel, L Grozdanov… - Applied and …, 2007 - Am Soc Microbiol
… polyketides have … polyketide biosynthesis, termed type I polyketide synthases (PKSs) (42),
are so far known exclusively from microorganisms, it has long been suspected that bacteria …
are so far known exclusively from microorganisms, it has long been suspected that bacteria …
Bioactive compounds synthesized by non-ribosomal peptide synthetases and type-I polyketide synthases discovered through genome-mining and metagenomics
K Nikolouli, D Mossialos - Biotechnology letters, 2012 - Springer
… of microbial genomes led to discovery of novel bioactive compounds synthesized by NRPS
and PKS-I through genome-… field which directly studies microbial genomes or specific gene …
and PKS-I through genome-… field which directly studies microbial genomes or specific gene …
Genomic insights into the distribution, genetic diversity and evolution of polyketide synthases and nonribosomal peptide synthetases
… Bacterial genome coverage is heavily biased toward pathogenic strains. Recent efforts
have attempted to obtain genomes from the poorly covered phylogenetic branches [18]. This …
have attempted to obtain genomes from the poorly covered phylogenetic branches [18]. This …
Bacterial type III polyketide synthases: phylogenetic analysis and potential for the production of novel secondary metabolites by heterologous expression in …
F Gross, N Luniak, O Perlova, N Gaitatzis… - Archives of …, 2006 - Springer
… Type III polyketide synthases (PKS) were regarded as typical for plant secondary metabolism
before they were found in microorganisms recently. Due to microbial genome sequencing …
before they were found in microorganisms recently. Due to microbial genome sequencing …
[HTML][HTML] PKMiner: a database for exploring type II polyketide synthases
J Kim, GS Yi - BMC microbiology, 2012 - Springer
… chemotype-prediction rules for the analysis of type II PKS gene clusters observed in bacterial
genomes. These rules were effective in identifying novel candidates of type II PKS gene …
genomes. These rules were effective in identifying novel candidates of type II PKS gene …
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