The concept of the species 'pan-genome', the union of 'core'conserved genes and all
'accessory'non-conserved genes across all strains of a species, was first proposed in …

In this contribution, we will review how much is currently known about fungal evolution, and
how well phylogenetic hypotheses are supported by the data that were used for these …

In phylogenomics the evolutionary relationship of organisms is studied by their genomic
information. A common approach to phylogenomics is to extract related genes from each …

The recent proliferation of genome sequencing in diverse fungal species has provided the
first opportunity for comparative genome analysis across a eukaryotic kingdom. Here, we …

Like other domains of life, research into the biology of filamentous microbes has greatly
benefited from the advent of whole-genome sequencing. Next-generation sequencing …

Mitochondrial (mt) genes, such as cytochrome C oxidase genes (cox), have been widely
used for barcoding in many groups of organisms, although this approach has been less …

The fungal genus Aspergillus contains a diversity of species divided into taxonomic sections
of closely related species. Section Flavi contains 33 species, many of industrial, agricultural …

Since the publication of the first fungal genome in 1996, over 400 fungal genome projects
have been launched, which makes fungi the most sequenced eukaryotic taxon. In this …

Mitochondrial (mt) genomes are intensively studied in Ascomycota and Basidiomycota, but
they are poorly documented in basal fungal lineages. In this study, we sequenced the …

Genome-enabled mycology is a rapidly expanding field that is characterized by the
pervasive use of genome-scale data and associated computational tools in all aspects of …