Kingdom-wide analysis of fungal protein-coding and tRNA genes reveals conserved patterns of adaptive evolution
Protein-coding genes evolved codon usage bias due to the combined but uneven effects of
adaptive and nonadaptive influences. Studies in model fungi agree on codon usage bias as …
adaptive and nonadaptive influences. Studies in model fungi agree on codon usage bias as …
[图书][B] Molecular identification of fungi
Y Gherbawy, K Voigt - 2010 - Springer
Fungi comprise a vast variety of microorganisms and are numerically among the most
abundant eukaryotes on Earth's biosphere. They enjoy great popularity in pharmaceutical …
abundant eukaryotes on Earth's biosphere. They enjoy great popularity in pharmaceutical …
The complete mitochondrial genomes of two model ectomycorrhizal fungi (Laccaria): features, intron dynamics and phylogenetic implications
Laccaria amethystine and L. bicolor have served as model species for studying the life
history and genetics of ectomycorrhizal fungi. However, the characterizations and variations …
history and genetics of ectomycorrhizal fungi. However, the characterizations and variations …
Pandora's mycological box: molecular sequences vs. morphology in understanding fungal relationships and biodiversity
DL Hawksworth - Revista Iberoamericana de Micología, 2006 - Elsevier
Fundamental reappraisals of diverse traditional ideas in mycology have become necessary
as a result of molecular insights. These different insights are discussed in relation to: the …
as a result of molecular insights. These different insights are discussed in relation to: the …
FTFD: an informatics pipeline supporting phylogenomic analysis of fungal transcription factors
Genomes of more than 60 fungal species have been sequenced to date, yet there has been
no systematic approach to analyze fungal transcription factors (TFs) kingdom widely. We …
no systematic approach to analyze fungal transcription factors (TFs) kingdom widely. We …
Mitogenome sequence accuracy using different elucidation methods
R Velozo Timbó, R Coiti Togawa, M MC Costa… - PloS one, 2017 - journals.plos.org
Mitogenome sequences are highly desired because they are used in several biological
disciplines. Their elucidation has been facilitated through the development of massive …
disciplines. Their elucidation has been facilitated through the development of massive …
FungiDB: an integrated functional genomics database for fungi
JE Stajich, T Harris, BP Brunk, J Brestelli… - Nucleic acids …, 2012 - academic.oup.com
Abstract FungiDB (http://FungiDB. org) is a functional genomic resource for pan-fungal
genomes that was developed in partnership with the Eukaryotic Pathogen Bioinformatic …
genomes that was developed in partnership with the Eukaryotic Pathogen Bioinformatic …
The first two mitochondrial genomes from Apiotrichum reveal mitochondrial evolution and different taxonomic assignment of Trichosporonales
Q Li, W Xiao, P Wu, T Zhang, P Xiang, Q Wu, L Zou… - IMA fungus, 2023 - Springer
Apiotrichum is a diverse anamorphic basidiomycetous yeast genus, and its mitogenome
characterization has not been revealed. In this study, we assembled two Apiotrichum …
characterization has not been revealed. In this study, we assembled two Apiotrichum …
Analysis of the complete mitochondrial genome of Pochonia chlamydosporia suggests a close relationship to the invertebrate-pathogenic fungi in Hypocreales
R Lin, C Liu, B Shen, M Bai, J Ling, G Chen, Z Mao… - BMC microbiology, 2015 - Springer
Abstract Background The fungus Pochonia chlamydosporia parasitizes nematode eggs and
has become one of the most promising biological control agents (BCAs) for plant-parasitic …
has become one of the most promising biological control agents (BCAs) for plant-parasitic …
The First Five Mitochondrial Genomes for the Family Nidulariaceae Reveal Novel Gene Rearrangements, Intron Dynamics, and Phylogeny of Agaricales
Z Li, T Xie, X Feng, Z Wang, C Lin, G Li, XZ Li… - International Journal of …, 2023 - mdpi.com
The family Nidulariaceae, consisting of five genera including Cyathus, is a unique group of
mushrooms commonly referred to as bird's nest fungi due to their striking resemblance to …
mushrooms commonly referred to as bird's nest fungi due to their striking resemblance to …