Site and land-use associations of soil bacteria and fungi define core and indicative taxa

F Gschwend, M Hartmann, J Mayerhofer… - FEMS Microbiology …, 2021 - academic.oup.com
Soil microbial diversity has major influences on ecosystem functions and services. However,
due to its complexity and uneven distribution of abundant and rare taxa, quantification of soil …

[PDF][PDF] Bacterial community establishment in native and non-native soils and the effect of fungal colonization

R Nazir, AV Semenov, N Sarigul, JD van Elsas - Microbiol. Discov, 2013 - Citeseer
Bacterial communities are essential parts of living soils. However, we understand very little
of how soil matrices govern the structure of the local microbiota. Here, we report on …

Soil characteristics more strongly influence soil bacterial communities than land-use type

EE Kuramae, E Yergeau, LC Wong… - FEMS microbiology …, 2012 - academic.oup.com
To gain insight into the factors driving the structure of bacterial communities in soil, we
applied real-time PCR, PCR-denaturing gradient gel electrophoreses, and phylogenetic …

Culturing captures members of the soil rare biosphere

A Shade, CS Hogan, AK Klimowicz… - Environmental …, 2012 - Wiley Online Library
The ecological significance of rare microorganisms within microbial communities remains an
important, unanswered question. Microorganisms of extremely low abundance (the 'rare …

Changes of soil bacterial diversity as a consequence of agricultural land use in a semi-arid ecosystem

GC Ding, YM Piceno, H Heuer, N Weinert… - PLOS …, 2013 - journals.plos.org
Natural scrublands in semi-arid deserts are increasingly being converted into fields. This
results in losses of characteristic flora and fauna, and may also affect microbial diversity. In …

Ecological and genomic analyses of candidate phylum WPS‐2 bacteria in an unvegetated soil

A Sheremet, GM Jones, J Jarett… - Environmental …, 2020 - Wiley Online Library
Members of the bacterial candidate phylum WPS‐2 (or Eremiobacterota) are abundant in
several dry, bare soil environments. In a bare soil deposited by an extinct iron–sulfur spring …

Construction of viable soil defined media using quantitative metabolomics analysis of soil metabolites

S Jenkins, TL Swenson, R Lau, AM Rocha… - Frontiers in …, 2017 - frontiersin.org
Exometabolomics enables analysis of metabolite utilization of low molecular weight organic
substances by soil bacteria. Environmentally-based defined media are needed to examine …

Effect of different carbon sources on community composition of bacterial enrichments from soil

B Wawrik, L Kerkhof, J Kukor… - Applied and …, 2005 - Am Soc Microbiol
Soil is a highly heterogeneous matrix, which can contain thousands of different bacterial
species per gram. Only a small component of this diversity (maybe< 1%) is commonly …

The effect of plant diversity and soil properties on soil microbial biomass and activity in a novel ecosystem

W Bierza, G Woźniak, A Kompała-Bąba, F Magurno… - Sustainability, 2023 - mdpi.com
Plant–microbial relations have not yet been fully disclosed in natural or seminatural
ecosystems, nor in novel ecosystems developing spontaneously on post-coal mine heaps …

Multivariate approach to characterizing soil microbial communities in pristine and agricultural sites in Northwest Argentina

MS Montecchia, OS Correa, MA Soria, SD Frey… - Applied soil ecology, 2011 - Elsevier
Land use effects on microbial communities may have profound impacts on agricultural
productivity and ecosystem sustainability as they are critical in soil quality and health. The …