Functional assays and metagenomic analyses reveals differences between the microbial communities inhabiting the soil horizons of a Norway spruce plantation
… This functional stratification according to the soil horizon was also confirmed by a … metagenomic
analyses. Together, our results suggest that the soil stratification and particularly the soil …
analyses. Together, our results suggest that the soil stratification and particularly the soil …
Metagenomic sequencing of multiple soil horizons and sites in close vicinity revealed novel secondary metabolite diversity
… Amplicon analysis of specific genes of interest has proven to be an efficient and cost-effective
strategy for metagenomic analysis. Amplifying specific genes of interest allows high …
strategy for metagenomic analysis. Amplifying specific genes of interest allows high …
Longitudinal metagenomic analysis of the water and soil from Gulf of Mexico beaches affected by the Deep Water Horizon oil spill
W Widger, G Golovko, A Martinez, E Ballesteros… - Nature …, 2011 - nature.com
… in the analysis of environmental metagenomes were their … successfully applied to the
analysis of microbial composition of … -based analysis of the entire genomic material (metagenome) …
analysis of microbial composition of … -based analysis of the entire genomic material (metagenome) …
Ecological and genomic attributes of novel bacterial taxa that thrive in subsurface soil horizons
… abundant in deeper soil horizons with low organic C concentrations. From our metagenomic
data, … TEB led the amplicon and shotgun metagenomic analyses along with the associated …
data, … TEB led the amplicon and shotgun metagenomic analyses along with the associated …
Distinct taxonomic and functional profiles of the microbiome associated with different soil horizons of a moist tussock tundra in Alaska
BM Tripathi, HM Kim1, JY Jung, S Nam, HT Ju… - Frontiers in …, 2019 - frontiersin.org
… of microbiomes between soil horizons and coring points, we used analysis of variance (…
Furthermore, our metagenome data showed a significant increase in relative abundance of …
Furthermore, our metagenome data showed a significant increase in relative abundance of …
Recent advances and perspectives in metagenomic studies of soil microbial communities
EV Pershina, EE Andronov, AG Pinaev… - Management of microbial …, 2013 - Springer
… of soil metagenome primarily by the analysis of soil microbial … spatial organization of soil
metagenome associated with micro… in soil can vary significantly depending on soil horizon and …
metagenome associated with micro… in soil can vary significantly depending on soil horizon and …
Effect of soil horizon stratigraphy on the microbial ecology of alpine paleosols
JM Young, T Skvortsov, BP Kelleher… - Science of the Total …, 2019 - Elsevier
… , this analysis makes it abundantly clear that soil horizon … Firstly, metagenomes are not
expected to be static over time, so … Our full metagenome data, for the first time, show that soil …
expected to be static over time, so … Our full metagenome data, for the first time, show that soil …
The potential of metagenomic approaches for understanding soil microbial processes
… and bioinformatics analysis tools now enable the generation of a metagenome from … in soil.
The purpose of this review is to describe the steps involved in producing a soil metagenome, …
The purpose of this review is to describe the steps involved in producing a soil metagenome, …
A metagenomic-based survey of microbial (de) halogenation potential in a German forest soil
… forest soil by shotgun metagenomic sequencing. Metagenomic libraries of three soil horizons
… samples 71 and metagenomics analyses of permafrost soils 72 . Bacterial reads in the …
… samples 71 and metagenomics analyses of permafrost soils 72 . Bacterial reads in the …
Assessment of diversity indices for the characterization of the soil prokaryotic community by metagenomic analysis
TI Chernov, AK Tkhakakhova, OV Kutovaya - Eurasian soil science, 2015 - Springer
… The study of soil metagenomes is based on the isolation of … wide appli cation of metagenomics
for assessing the diversity of … for assessing the diversity of the soil bacterial metagenome. …
for assessing the diversity of … for assessing the diversity of the soil bacterial metagenome. …
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