[HTML][HTML] AMMOS: Automated Molecular Mechanics Optimization tool for in silico Screening
Background Virtual or in silico ligand screening combined with other computational methods
is one of the most promising methods to search for new lead compounds, thereby greatly …
is one of the most promising methods to search for new lead compounds, thereby greatly …
Automated docking for novel drug discovery
M Bello, M Martínez-Archundia… - Expert opinion on drug …, 2013 - Taylor & Francis
Introduction: The volume of three-dimensional structural information of macromolecules and
the number of computational tools to predict binding modes and affinities of molecular …
the number of computational tools to predict binding modes and affinities of molecular …
Latest trends in structure based drug design with protein targets
A Bagchi - Advances in Protein Chemistry and Structural Biology, 2020 - Elsevier
Abstract Structure based drug designing is an important endeavor in the field of structural
bioinformatics. Previously the entire process was dependent on the wet-lab experiments to …
bioinformatics. Previously the entire process was dependent on the wet-lab experiments to …
Computational approaches in the discovery and development of therapeutic and prophylactic agents for viral diseases
Over the last two decades, computational technologies have played a crucial role in antiviral
drug development. Whenever a virus spreads and becomes a threat to global health, it …
drug development. Whenever a virus spreads and becomes a threat to global health, it …
Design of aromatic inhibitors of influenza virus neuraminidase
M Luo, GM Air, WJ Brouillette - Journal of Infectious Diseases, 1997 - academic.oup.com
Abstract Structure-based drug design, a terminology used to describe rational drug design
by complementing the structure, spatially and chemically, of the target macromolecule, is …
by complementing the structure, spatially and chemically, of the target macromolecule, is …
From computers to bedside: Computational chemistry contributing to FDA approval
C Athanasiou, Z Cournia - Biomolecular Simulations in Structure …, 2018 - books.google.com
The drug design process is unequivocally a time-consuming and expensive endeavor, with
recent estimates classifying it as a $2.6 billion expenditure [1]. From target identification and …
recent estimates classifying it as a $2.6 billion expenditure [1]. From target identification and …
Target-induced formation of neuraminidase inhibitors from in vitro virtual combinatorial libraries
M Hochgürtel, H Kroth, D Piecha… - Proceedings of the …, 2002 - National Acad Sciences
Neuraminidase, a key enzyme responsible for influenza virus propagation, has been used
as a template for selective synthesis of small subsets of its own inhibitors from theoretically …
as a template for selective synthesis of small subsets of its own inhibitors from theoretically …
Molecular docking and structure-based virtual screening
C Liao, ML Peach, R Yao, MC Nicklaus - 2013 - Taylor & Francis
The goal of drug discovery is to find chemical compounds that have a specific biological
effect. One of the main techniques used today in drug discovery is high-throughput …
effect. One of the main techniques used today in drug discovery is high-throughput …
Scoring functions for virtual screening
F Spyrakis, GE Kellogg, A Amadasi… - Frontiers in Drug …, 2007 - ingentaconnect.com
The docking and scoring paradigm can be considered as the combination of two separate
problems. The first aspect is a geometric, or more broadly an informatics problem: how can …
problems. The first aspect is a geometric, or more broadly an informatics problem: how can …
Ensemble-based virtual screening reveals potential novel antiviral compounds for avian influenza neuraminidase
Avian influenza virus subtype H5N1 is a potential pandemic threat with human-adapted
strains resistant to antiviral drugs. Although virtual screening (VS) against a crystal or …
strains resistant to antiviral drugs. Although virtual screening (VS) against a crystal or …