Fabind: Fast and accurate protein-ligand binding
Modeling the interaction between proteins and ligands and accurately predicting their
binding structures is a critical yet challenging task in drug discovery. Recent advancements …
binding structures is a critical yet challenging task in drug discovery. Recent advancements …
CAPLA: improved prediction of protein–ligand binding affinity by a deep learning approach based on a cross-attention mechanism
Motivation Accurate and rapid prediction of protein–ligand binding affinity is a great
challenge currently encountered in drug discovery. Recent advances have manifested a …
challenge currently encountered in drug discovery. Recent advances have manifested a …
Deep learning in drug design: protein-ligand binding affinity prediction
Computational drug design relies on the calculation of binding strength between two
biological counterparts especially a chemical compound, ie, a ligand, and a protein …
biological counterparts especially a chemical compound, ie, a ligand, and a protein …
DeepDTAF: a deep learning method to predict protein–ligand binding affinity
Biomolecular recognition between ligand and protein plays an essential role in drug
discovery and development. However, it is extremely time and resource consuming to …
discovery and development. However, it is extremely time and resource consuming to …
[HTML][HTML] CarsiDock: a deep learning paradigm for accurate protein–ligand docking and screening based on large-scale pre-training
The expertise accumulated in deep neural network-based structure prediction has been
widely transferred to the field of protein–ligand binding pose prediction, thus leading to the …
widely transferred to the field of protein–ligand binding pose prediction, thus leading to the …
DeepAtom: A framework for protein-ligand binding affinity prediction
The cornerstone of computational drug design is the calculation of binding affinity between
two biological counterparts especially a chemical compound, ie a ligand, and a protein …
two biological counterparts especially a chemical compound, ie a ligand, and a protein …
[HTML][HTML] Improving the generalizability of protein-ligand binding predictions with AI-Bind
Identifying novel drug-target interactions is a critical and rate-limiting step in drug discovery.
While deep learning models have been proposed to accelerate the identification process …
While deep learning models have been proposed to accelerate the identification process …
E3bind: An end-to-end equivariant network for protein-ligand docking
In silico prediction of the ligand binding pose to a given protein target is a crucial but
challenging task in drug discovery. This work focuses on blind flexible selfdocking, where …
challenging task in drug discovery. This work focuses on blind flexible selfdocking, where …
DEELIG: A deep learning approach to predict protein-ligand binding affinity
Protein-ligand binding prediction has extensive biological significance. Binding affinity helps
in understanding the degree of protein-ligand interactions and is a useful measure in drug …
in understanding the degree of protein-ligand interactions and is a useful measure in drug …
MGPLI: exploring multigranular representations for protein–ligand interaction prediction
Motivation The capability to predict the potential drug binding affinity against a protein target
has always been a fundamental challenge in silico drug discovery. The traditional …
has always been a fundamental challenge in silico drug discovery. The traditional …