Accurate prediction of hydration free energies and solvation structures using molecular density functional theory with a simple bridge functional
D Borgis, S Luukkonen, L Belloni… - The Journal of Chemical …, 2021 - pubs.aip.org
This paper assesses the ability of molecular density functional theory to predict efficiently
and accurately the hydration free energies of molecular solutes and the surrounding …
and accurately the hydration free energies of molecular solutes and the surrounding …
Which density functional should be used to model hydration?
RJ Hall, IH Hillier, MA Vincent - Chemical Physics Letters, 2000 - Elsevier
Which density functional should be used to model hydration? - ScienceDirect Skip to main
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Hydration free energies and solvation structures with molecular density functional theory in the hypernetted chain approximation
S Luukkonen, M Levesque, L Belloni… - The Journal of Chemical …, 2020 - pubs.aip.org
The capability of molecular density functional theory in its lowest, second-order
approximation, equivalent to the hypernetted chain approximation in integral equations, to …
approximation, equivalent to the hypernetted chain approximation in integral equations, to …
Assessing the accuracy of inhomogeneous fluid solvation theory in predicting hydration free energies of simple solutes
DJ Huggins, MC Payne - The Journal of Physical Chemistry B, 2013 - ACS Publications
Accurate prediction of hydration free energies is a key objective of any free energy method
that is applied to modeling and understanding interactions in the aqueous phase …
that is applied to modeling and understanding interactions in the aqueous phase …
Toward high-throughput predictions of the hydration free energies of small organic molecules from first principles
In this work we examine a multiscale procedure for predicting the solvation free energies of
small organic molecules in liquid water at ambient conditions. The experimental database …
small organic molecules in liquid water at ambient conditions. The experimental database …
SM6: A density functional theory continuum solvation model for calculating aqueous solvation free energies of neutrals, ions, and solute− water clusters
CP Kelly, CJ Cramer, DG Truhlar - Journal of chemical theory and …, 2005 - ACS Publications
A new charge model, called Charge Model 4 (CM4), and a new continuum solvent model,
called Solvation Model 6 (SM6), are presented. Using a database of aqueous solvation free …
called Solvation Model 6 (SM6), are presented. Using a database of aqueous solvation free …
Rapid prediction of solvation free energy. 2. The first-shell hydration (FiSH) continuum model
Local ordering of water in the first hydration shell around a solute is different from isotropic
bulk water. This leads to effects that are captured by explicit solvation models and missed by …
bulk water. This leads to effects that are captured by explicit solvation models and missed by …
Experimental compilation and computation of hydration free energies for ionic solutes
Although charged solutes are common in many chemical systems, traditional solvation
models perform poorly in calculating solvation energies of ions. One major obstacle is the …
models perform poorly in calculating solvation energies of ions. One major obstacle is the …
Predictions of hydration free energies from all-atom molecular dynamics simulations
DL Mobley, CI Bayly, MD Cooper… - The Journal of Physical …, 2009 - ACS Publications
Here, we computed the aqueous solvation (hydration) free energies of 52 small drug-like
molecules using an all-atom force field in explicit water. This differs from previous studies in …
molecules using an all-atom force field in explicit water. This differs from previous studies in …
Surveying implicit solvent models for estimating small molecule absolute hydration free energies
JL Knight, CL Brooks III - Journal of computational chemistry, 2011 - Wiley Online Library
Implicit solvent models are powerful tools in accounting for the aqueous environment at a
fraction of the computational expense of explicit solvent representations. Here, we compare …
fraction of the computational expense of explicit solvent representations. Here, we compare …