Structure-based drug design: docking and scoring

RT Kroemer - Current protein and peptide science, 2007 - ingentaconnect.com
This review gives an introduction into ligand-receptor docking and illustrates the basic
underlying concepts. An overview of different approaches and algorithms is provided …

Latest developments in molecular docking: 2010–2011 in review

E Yuriev, PA Ramsland - Journal of Molecular Recognition, 2013 - Wiley Online Library
The aim of docking is to accurately predict the structure of a ligand within the constraints of a
receptor binding site and to correctly estimate the strength of binding. We discuss, in detail …

Recent advances in docking and scoring

EM Krovat, T Steindl, T Langer - Current computer-aided drug …, 2005 - ingentaconnect.com
This review is focused on recent advances and new aspects in the field of molecular docking
and scoring, and it covers multiple applications and case studies. Basic requirements and …

[HTML][HTML] Challenges, applications, and recent advances of protein-ligand docking in structure-based drug design

SZ Grinter, X Zou - Molecules, 2014 - mdpi.com
The docking methods used in structure-based virtual database screening offer the ability to
quickly and cheaply estimate the affinity and binding mode of a ligand for the protein …

Scoring functions for protein-ligand docking

AN Jain - Current Protein and Peptide Science, 2006 - ingentaconnect.com
Virtual screening by molecular docking has become established as a method for drug lead
discovery and optimization. All docking algorithms make use of a scoring function in …

The latest automated docking technologies for novel drug discovery

J Caballero - Expert opinion on drug discovery, 2021 - Taylor & Francis
Introduction Molecular docking has been consolidated as one of the most important methods
in the molecular modeling field. It has been recognized as a prominent tool in the study of …

Docking and scoring-Theoretically easy, practically impossible?

B Coupez, RA Lewis - Current medicinal chemistry, 2006 - ingentaconnect.com
Structure-based Drug Design (SBDD) is an essential part of the modern medicinal
chemistry, and has led to the acceleration of many projects, and even to drugs on the …

Structure-based approaches to drug design and virtual screening.

B Waszkowycz - Current opinion in drug discovery & development, 2002 - europepmc.org
Structure-based design has made an important contribution to drug discovery for many
years. Recently, the increasing availability of structural data and the affordability of high …

Receptor–ligand molecular docking

IA Guedes, CS de Magalhães, LE Dardenne - Biophysical reviews, 2014 - Springer
Docking methodology aims to predict the experimental binding modes and affinities of small
molecules within the binding site of particular receptor targets and is currently used as a …

A good ligand is hard to find: Automated docking methods

JM Blaney, JS Dixon - Perspectives in Drug Discovery and Design, 1993 - Springer
Many approaches have been developed for solving the 'docking problem': Predict the
structure and binding free energy of a ligand-receptor complex given only the structures of …