Towards the development of universal, fast and highly accurate docking/scoring methods: a long way to go
N Moitessier, P Englebienne, D Lee… - British journal of …, 2008 - Wiley Online Library
Accelerating the drug discovery process requires predictive computational protocols
capable of reducing or simplifying the synthetic and/or combinatorial challenge. Docking …
capable of reducing or simplifying the synthetic and/or combinatorial challenge. Docking …
Use of an induced fit receptor structure in virtual screening
Structured‐based drug design has traditionally relied on a single receptor structure as a
target for docking and screening studies. However, it has become increasingly clear that in …
target for docking and screening studies. However, it has become increasingly clear that in …
Flexible receptor docking for drug discovery
CF Wong - Expert opinion on drug discovery, 2015 - Taylor & Francis
Introduction: Molecular docking has become a popular method for virtual screening. Docking
small molecules to a rigid biological receptor is fast but could produce many false negatives …
small molecules to a rigid biological receptor is fast but could produce many false negatives …
Use of molecular docking computational tools in drug discovery
F Stanzione, I Giangreco, JC Cole - Progress in medicinal chemistry, 2021 - Elsevier
Molecular docking has become an important component of the drug discovery process.
Since first being developed in the 1980s, advancements in the power of computer hardware …
Since first being developed in the 1980s, advancements in the power of computer hardware …
Scoring functions for protein–ligand interactions: a critical perspective
T Schulz-Gasch, M Stahl - Drug Discovery Today: Technologies, 2004 - Elsevier
Scoring functions play an essential role in structure-based virtual screening. They are
required to guide the docking of candidate compounds to structures of receptor binding …
required to guide the docking of candidate compounds to structures of receptor binding …
High-throughput docking as a source of novel drug leads
JC Alvarez - Current opinion in chemical biology, 2004 - Elsevier
Receptor-based virtual screening has become a viable source of novel leads in the
pharmaceutical industry. The rapidly growing availability of structural information across …
pharmaceutical industry. The rapidly growing availability of structural information across …
Molecular docking in modern drug discovery: Principles and recent applications
A Sethi, K Joshi, K Sasikala… - Drug discovery and …, 2019 - books.google.com
The process of hunt of a lead molecule is a long and a tedious process and one is often
demoralized by the endless possibilities one has to search through. Fortunately …
demoralized by the endless possibilities one has to search through. Fortunately …
Detailed analysis of scoring functions for virtual screening
We present a comprehensive study of the performance of fast scoring functions for library
docking using the program FlexX as the docking engine. Four scoring functions, among …
docking using the program FlexX as the docking engine. Four scoring functions, among …
MedusaDock 2.0: efficient and accurate protein–ligand docking with constraints
J Wang, NV Dokholyan - Journal of chemical information and …, 2019 - ACS Publications
Molecular docking is the key ingredient of virtual drug screening, a promising and cost-
effective approach for finding new drugs. A critical limitation of this approach is the …
effective approach for finding new drugs. A critical limitation of this approach is the …
Beware of docking!
YC Chen - Trends in pharmacological sciences, 2015 - cell.com
Docking is now routine in virtual screening or lead optimization for drug screening and
design. The number of papers related to docking has dramatically increased over the past …
design. The number of papers related to docking has dramatically increased over the past …