Structure-based virtual screening for drug discovery: principles, applications and recent advances

E Lionta, G Spyrou, DK Vassilatis… - Current topics in …, 2014 - ingentaconnect.com
Structure-based drug discovery (SBDD) is becoming an essential tool in assisting fast and
cost-efficient lead discovery and optimization. The application of rational, structure-based …

The compromise of virtual screening and its impact on drug discovery

O Slater, M Kontoyianni - Expert opinion on drug discovery, 2019 - Taylor & Francis
Introduction: Docking and structure-based virtual screening (VS) have been standard
approaches in structure-based design for over two decades. However, our understanding of …

Structure-based drug design strategies in medicinal chemistry

AD Andricopulo, LB Salum… - Current topics in …, 2009 - ingentaconnect.com
A broad variety of medicinal chemistry approaches can be used for the identification of hits,
generation of leads, as well as to accelerate the development of high quality drug …

Docking and virtual screening in drug discovery

M Kontoyianni - Proteomics for drug discovery: Methods and protocols, 2017 - Springer
Stages in a typical drug discovery organization include target selection, hit identification,
lead optimization, preclinical and clinical studies. Hit identification and lead optimization are …

Combined strategies in structure-based virtual screening

Z Wang, H Sun, C Shen, X Hu, J Gao, D Li… - Physical Chemistry …, 2020 - pubs.rsc.org
The identification and optimization of lead compounds are inalienable components in drug
design and discovery pipelines. As a powerful computational approach for the identification …

Structure-based virtual screening for drug discovery: a problem-centric review

T Cheng, Q Li, Z Zhou, Y Wang, SH Bryant - The AAPS journal, 2012 - Springer
Abstract Structure-based virtual screening (SBVS) has been widely applied in early-stage
drug discovery. From a problem-centric perspective, we reviewed the recent advances and …

Virtual screening strategies in drug discovery: a critical review

A Lavecchia, C Di Giovanni - Current medicinal chemistry, 2013 - ingentaconnect.com
Virtual screening (VS) is a powerful technique for identifying hit molecules as starting points
for medicinal chemistry. The number of methods and softwares which use the ligand and …

Merging ligand-based and structure-based methods in drug discovery: An overview of combined virtual screening approaches

J Vázquez, M López, E Gibert, E Herrero, FJ Luque - Molecules, 2020 - mdpi.com
Virtual screening (VS) is an outstanding cornerstone in the drug discovery pipeline. A variety
of computational approaches, which are generally classified as ligand-based (LB) and …

The impact of compound library size on the performance of scoring functions for structure-based virtual screening

L Fresnais, PJ Ballester - Briefings in bioinformatics, 2021 - academic.oup.com
Larger training datasets have been shown to improve the accuracy of machine learning (ML)-
based scoring functions (SFs) for structure-based virtual screening (SBVS). In addition …

Docking-based virtual screening: recent developments

T Tuccinardi - Combinatorial chemistry & high throughput …, 2009 - ingentaconnect.com
Virtual (database) screening (VS) of molecules promises to accelerate the discovery of new
drugs and reduce costs by identifying molecules with high probabilities of binding to a target …