Molecular docking in modern drug discovery: Principles and recent applications
A Sethi, K Joshi, K Sasikala… - Drug discovery and …, 2019 - books.google.com
The process of hunt of a lead molecule is a long and a tedious process and one is often
demoralized by the endless possibilities one has to search through. Fortunately …
demoralized by the endless possibilities one has to search through. Fortunately …
Comparison of shape-matching and docking as virtual screening tools
PCD Hawkins, AG Skillman… - Journal of medicinal …, 2007 - ACS Publications
Ligand docking is a widely used approach in virtual screening. In recent years a large
number of publications have appeared in which docking tools are compared and evaluated …
number of publications have appeared in which docking tools are compared and evaluated …
Virtual screening: a fast tool for drug design
Computational screening of databases has become increasingly popular in the
pharmaceutical research. Virtual screening uses computer based methods to discover new …
pharmaceutical research. Virtual screening uses computer based methods to discover new …
Virtual screening strategies in drug discovery
C McInnes - Current opinion in chemical biology, 2007 - Elsevier
The identification of novel therapeutic targets and characterization of their 3D structures is
increasing at a dramatic rate. Computational screening methods continue to be developed …
increasing at a dramatic rate. Computational screening methods continue to be developed …
New methodologies for ligand-based virtual screening
FL Stahura, J Bajorath - Current pharmaceutical design, 2005 - ingentaconnect.com
Computational screening of compound databases has become increasingly popular in
pharmaceutical research. Virtual screening approaches can roughly be divided into target …
pharmaceutical research. Virtual screening approaches can roughly be divided into target …
Docking-based generative approaches in the search for new drug candidates
Highlights•Compound enumeration coupled with docking is rapidly gaining
popularity.•Docking-based generative models are reviewed.•New taxonomy for docking …
popularity.•Docking-based generative models are reviewed.•New taxonomy for docking …
Evaluation of library ranking efficacy in virtual screening
M Kontoyianni, GS Sokol… - Journal of computational …, 2005 - Wiley Online Library
We present the results of a comprehensive study in which we explored how the docking
procedure affects the performance of a virtual screening approach. We used four docking …
procedure affects the performance of a virtual screening approach. We used four docking …
Calculating an optimal box size for ligand docking and virtual screening against experimental and predicted binding pockets
WP Feinstein, M Brylinski - Journal of cheminformatics, 2015 - Springer
Background Computational approaches have emerged as an instrumental methodology in
modern research. For example, virtual screening by molecular docking is routinely used in …
modern research. For example, virtual screening by molecular docking is routinely used in …
Structure-based approaches to drug design and virtual screening.
B Waszkowycz - Current opinion in drug discovery & development, 2002 - europepmc.org
Structure-based design has made an important contribution to drug discovery for many
years. Recently, the increasing availability of structural data and the affordability of high …
years. Recently, the increasing availability of structural data and the affordability of high …
Selecting machine-learning scoring functions for structure-based virtual screening
PJ Ballester - Drug discovery today: technologies, 2019 - Elsevier
Interest in docking technologies has grown parallel to the ever increasing number and
diversity of 3D models for macromolecular therapeutic targets. Structure-Based Virtual …
diversity of 3D models for macromolecular therapeutic targets. Structure-Based Virtual …