[HTML][HTML] Epitranscriptome: review of top 25 most-studied RNA modifications

VA Arzumanian, GV Dolgalev, IY Kurbatov… - International Journal of …, 2022 - mdpi.com
The alphabet of building blocks for RNA molecules is much larger than the standard four
nucleotides. The diversity is achieved by the post-transcriptional biochemical modification of …

[HTML][HTML] A panoramic view of RNA modifications: exploring new frontiers

Z Zhang, E Park, L Lin, Y Xing - 2018 - Springer
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RNA modifications: what have we learned and where are we headed?

M Frye, SR Jaffrey, T Pan, G Rechavi… - Nature Reviews …, 2016 - nature.com
Proper control of the transcriptome is key for diverse aspects of gene expression, cellular
functions and development, and its disruption can result in disease. A rapidly accumulating …

Understanding RNA modifications: the promises and technological bottlenecks of the 'epitranscriptome'

M Schaefer, U Kapoor, MF Jantsch - Open biology, 2017 - royalsocietypublishing.org
The discovery of mechanisms that alter genetic information via RNA editing or introducing
covalent RNA modifications points towards a complexity in gene expression that challenges …

[HTML][HTML] A census and categorization method of epitranscriptomic marks

J Mathlin, L Le Pera, T Colombo - International Journal of Molecular …, 2020 - mdpi.com
In the past few years, thorough investigation of chemical modifications operated in the cells
on ribonucleic acid (RNA) molecules is gaining momentum. This new field of research has …

[HTML][HTML] The epitranscriptome toolbox

S Moshitch-Moshkovitz, D Dominissini, G Rechavi - Cell, 2022 - cell.com
In the last decade, the notion that mRNA modifications are involved in regulation of gene
expression was demonstrated in thousands of studies. To date, new technologies and …

Positioning Europe for the EPITRANSCRIPTOMICS challenge

MF Jantsch, A Quattrone, M O'Connell, M Helm… - RNA biology, 2018 - Taylor & Francis
The genetic alphabet consists of the four letters: C, A, G, and T in DNA and C, A, G, and U in
RNA. Triplets of these four letters jointly encode 20 different amino acids out of which …

[HTML][HTML] Deciphering epitranscriptome: modification of mRNA bases provides a new perspective for post-transcriptional regulation of gene expression

S Kumar, T Mohapatra - Frontiers in cell and developmental biology, 2021 - frontiersin.org
Gene regulation depends on dynamic and reversibly modifiable biological and chemical
information in the epigenome/epitranscriptome. Accumulating evidence suggests that …

[HTML][HTML] Bioinformatics approaches for deciphering the epitranscriptome: recent progress and emerging topics

L Liu, B Song, J Ma, Y Song, SY Zhang, Y Tang… - Computational and …, 2020 - Elsevier
Post-transcriptional RNA modification occurs on all types of RNA and plays a vital role in
regulating every aspect of RNA function. Thanks to the development of high-throughput …

DirectRMDB: a database of post-transcriptional RNA modifications unveiled from direct RNA sequencing technology

Y Zhang, J Jiang, J Ma, Z Wei, Y Wang… - Nucleic Acids …, 2023 - academic.oup.com
With advanced technologies to map RNA modifications, our understanding of them has
been revolutionized, and they are seen to be far more widespread and important than …