Detection of chromosomal aberrations in clinical practice: from karyotype to genome sequence

CL Martin, D Warburton - Annual review of genomics and …, 2015 - annualreviews.org
Since the inception of clinical cytogenetics in the late 1950s, the field has witnessed the
evolution of multiple methodologies for the evaluation of chromosomal imbalances and …

[PDF][PDF] Diagnostic utility of next-generation sequencing for disorders of somatic mosaicism: a five-year cumulative cohort

SN McNulty, MJ Evenson, MM Corliss… - The American Journal of …, 2019 - cell.com
Disorders of somatic mosaicism (DoSM) are a diverse group of syndromic and non-
syndromic conditions caused by mosaic variants in genes that regulate cell survival and …

Array CGH identifies copy number changes in 11% of 520 MDS patients with normal karyotype and uncovers prognostically relevant deletions

S Volkert, T Haferlach, J Holzwarth, M Zenger, W Kern… - Leukemia, 2016 - nature.com
1 Ren R. Mechanisms of BCR-ABL in the pathogenesis of chronic myelogenous leukaemia.
Nat Rev Cancer 2005; 5: 172-183. 2 Sloma I, Jiang X, Eaves AC, Eaves CJ. Insights into the …

Evidence-based genomic diagnosis characterized chromosomal and cryptic imbalances in 30 elderly patients with myelodysplastic syndrome and acute myeloid …

R Bajaj, F Xu, B Xiang, K Wilcox, AJ DiAdamo… - Molecular …, 2011 - Springer
Background To evaluate the clinical validity of genome-wide oligonucleotide array
comparative genomic hybridization (aCGH) for detecting somatic abnormalities, we have …

A clinical survey of mosaic single nucleotide variants in disease-causing genes detected by exome sequencing

Y Cao, MJ Tokita, ES Chen, R Ghosh, T Chen, Y Feng… - Genome Medicine, 2019 - Springer
Background Although mosaic variation has been known to cause disease for decades, high-
throughput sequencing technologies with the analytical sensitivity to consistently detect …

Detection of structural mosaicism from targeted and whole-genome sequencing data

DA King, A Sifrim, TW Fitzgerald, R Rahbari… - Genome …, 2017 - genome.cshlp.org
Structural mosaic abnormalities are large post-zygotic mutations present in a subset of cells
and have been implicated in developmental disorders and cancer. Such mutations have …

The shadowlands of MDS: idiopathic cytopenias of undetermined significance (ICUS) and clonal hematopoiesis of indeterminate potential (CHIP)

L Malcovati, M Cazzola - Hematology 2014, the American …, 2015 - ashpublications.org
The WHO classification provides the best diagnostic approach to myelodysplastic
syndromes (MDS). However, biologic and analytic limitations have emerged in the criteria …

Distinctive types of postzygotic single-nucleotide mosaicisms in healthy individuals revealed by genome-wide profiling of multiple organs

AY Huang, X Yang, S Wang, X Zheng, Q Wu… - PLoS …, 2018 - journals.plos.org
Postzygotic single-nucleotide mosaicisms (pSNMs) have been extensively studied in tumors
and are known to play critical roles in tumorigenesis. However, the patterns and origin of …

Somatic mutation load and spectra: A record of DNA damage and repair in healthy human cells

N Saini, DA Gordenin - Environmental and molecular …, 2018 - Wiley Online Library
Somatic genome instability is a hallmark of cancer genomes and has been linked to aging
and a variety of other pathologies. Large‐scale cancer genome and exome sequencing …

Somatic mutations linked to future disease risk

DJ Burgess - Nature Reviews Genetics, 2015 - nature.com
Detecting somatic mutations that affect cancer driver genes in precancerous cells could
inform early clinical interventions. Two exome sequencing studies have now identified the …