[PDF][PDF] Detection of period-3 behavior in genomic sequences using singular value decomposition

M Akhtar, E Ambikairajah, J Epps - Proceedings of the IEEE …, 2005 - academia.edu
Many digital signal processing techniques have been used to automatically distinguish the
protein coding regions (exons) from non-coding regions (introns) in a DNA sequence …

Power spectrum analysis for DNA sequences

JA Berger, SK Mitra, J Astola - … International Symposium on …, 2003 - ieeexplore.ieee.org
Certain biological functions are related to observe periodic behavior in DNA sequences, for
example the period-3 behavior in exons. Appropriately, the field of digital signal processing …

The role of the symbolic-to-numerical mapping in the detection of DNA periodicities

A Rushdi, J Tuqan - 2008 IEEE International Workshop on …, 2008 - ieeexplore.ieee.org
The detection of many forms of periodicities in DNA sequences has been an active area of
research in recent years. Most of the signal processing based methods have used the …

ESTIMATION OF PROTEIN-CODING REGIONS IN NUMERICAL DNA SEQUENCES USING VARIABLE LENGTH WINDOW METHOD BASED ON 3-D Z-CURVE

H SABERKARI, M SHAMSI, MH SEDDAGHI - 2017 - sid.ir
In recent years, estimation of protein-coding regions in numerical deoxyribonucleic acid
(DNA) sequences using signal processing tools has been a challenging issue in …

A DSP perspective to the period-3 detection problem

J Tuqan, A Rushdi - 2006 IEEE International Workshop on …, 2006 - ieeexplore.ieee.org
Many signal processing techniques have been introduced in the past to identify the protein
coding regions by detecting the so-called period-3 component in the DNA spectrum …

[引用][C] Numerical Representations Involved in DNA Repeats Detection Using Spectral Analysis

G Petre, A VOINA

A fourier product method for detecting approximate tandem repeats in DNA

VA Emanuele, TT Tran, GT Zhou - IEEE/SP 13th Workshop on …, 2005 - ieeexplore.ieee.org
Finding repetitive sequences in DNA is of particular interest in biology due to their role in
genetic diseases, human gene mapping, evolution, and many other important and …

[PDF][PDF] Numerical representations involved in DNA repeats detection using spectral analysis

PG Pop, A Voina - Studies in Informatics and Control, 2011 - scholar.archive.org
Sequence repeats are the simplest form of regularity and the detection of repeats is
important in biology and medicine as it can be used for phylogenic studies and disease …

[引用][C] Periodic Behavior Analysis of Protein Coding Regions by Cellular Neural Network

CF Cheng, CW Yang, HC Chang

A comparison of periodicity profile methods for sequence analysis

M Bellani, J Epps, GA Huttley - Proceedings 2012 IEEE …, 2012 - ieeexplore.ieee.org
While period detection in biological sequence data has received considerable attention, it is
unclear which methods may be best suited to the problem of exploratory period estimation …