Calculation of the solvation free energy of neutral and ionic molecules in diverse solvents

S Lee, KH Cho, CJ Lee, GE Kim, CH Na… - Journal of chemical …, 2011 - ACS Publications
The solvation free energy density (SFED) model was modified to extend its applicability and
predictability. The parametrization process was performed with a large, diverse set of …

A generalized G-SFED continuum solvation free energy calculation model

S Lee, KH Cho, YM Kang… - Proceedings of the …, 2013 - National Acad Sciences
An empirical continuum solvation model, solvation free energy density (SFED), has been
developed to calculate solvation free energies of a molecule in the most frequently used …

Approaches for calculating solvation free energies and enthalpies demonstrated with an update of the FreeSolv database

G Duarte Ramos Matos, DY Kyu… - Journal of Chemical & …, 2017 - ACS Publications
Solvation free energies can now be calculated precisely from molecular simulations,
providing a valuable test of the energy functions underlying these simulations. Here we …

DISSOLVE: Database of ionic solutes' solvation free energies

T Nevolianis, M Baumann, N Viswanathan… - Fluid Phase …, 2023 - Elsevier
Predicting values of the solvation free energy of ionic solutes is essential in chemical and
biological processes as this property is required to model kinetics, electrochemical …

Improving the accuracy of the linear interaction energy method for solvation free energies

M Almlöf, J Carlsson, J Åqvist - Journal of chemical theory and …, 2007 - ACS Publications
A linear response method for estimating the free energy of solvation is presented and
validated using explicit solvent molecular dynamics, thermodynamic perturbation …

Performance of the SMD and SM8 models for predicting solvation free energy of neutral solutes in methanol, dimethyl sulfoxide and acetonitrile

CC Zanith, JR Pliego - Journal of computer-aided molecular design, 2015 - Springer
The continuum solvation models SMD and SM8 were developed using 2,346 solvation free
energy values for 318 neutral molecules in 91 solvents as reference. However, no solvation …

Accuracy of computational solvation free energies for neutral and ionic compounds: Dependence on level of theory and solvent model

S Rayne, K Forest - Nature Precedings, 2010 - nature.com
Gas to aqueous phase standard state (1 atm to 1 mol/L; 298.15 K) free energies of solvation
([DELTA] G^ o^~ solv~) were calculated for a range of neutral and ionic inorganic and …

A partition coefficient calculation method with the SFED model

Y In, HH Chai, KT No - Journal of chemical information and …, 2005 - ACS Publications
The Solvation Free Energy Density (SFED) model, a solvation model proposed by No et al.
was modified to give better solvation free energies of the molecules having high polarizable …

Solvation free energies for aqueous and nonaqueous solutions computed using PM7 atomic charges

SF Vyboishchikov, AA Voityuk - Journal of Chemical Information …, 2021 - ACS Publications
We describe a simple and accurate method, ESE-PM7, for calculating solvation free
energies Δ G solv° in aqueous and nonaqueous solutions. The method is based on a …

Surveying implicit solvent models for estimating small molecule absolute hydration free energies

JL Knight, CL Brooks III - Journal of computational chemistry, 2011 - Wiley Online Library
Implicit solvent models are powerful tools in accounting for the aqueous environment at a
fraction of the computational expense of explicit solvent representations. Here, we compare …