Calculation of the solvation free energy of neutral and ionic molecules in diverse solvents
The solvation free energy density (SFED) model was modified to extend its applicability and
predictability. The parametrization process was performed with a large, diverse set of …
predictability. The parametrization process was performed with a large, diverse set of …
A generalized G-SFED continuum solvation free energy calculation model
An empirical continuum solvation model, solvation free energy density (SFED), has been
developed to calculate solvation free energies of a molecule in the most frequently used …
developed to calculate solvation free energies of a molecule in the most frequently used …
Approaches for calculating solvation free energies and enthalpies demonstrated with an update of the FreeSolv database
G Duarte Ramos Matos, DY Kyu… - Journal of Chemical & …, 2017 - ACS Publications
Solvation free energies can now be calculated precisely from molecular simulations,
providing a valuable test of the energy functions underlying these simulations. Here we …
providing a valuable test of the energy functions underlying these simulations. Here we …
DISSOLVE: Database of ionic solutes' solvation free energies
T Nevolianis, M Baumann, N Viswanathan… - Fluid Phase …, 2023 - Elsevier
Predicting values of the solvation free energy of ionic solutes is essential in chemical and
biological processes as this property is required to model kinetics, electrochemical …
biological processes as this property is required to model kinetics, electrochemical …
Improving the accuracy of the linear interaction energy method for solvation free energies
M Almlöf, J Carlsson, J Åqvist - Journal of chemical theory and …, 2007 - ACS Publications
A linear response method for estimating the free energy of solvation is presented and
validated using explicit solvent molecular dynamics, thermodynamic perturbation …
validated using explicit solvent molecular dynamics, thermodynamic perturbation …
Performance of the SMD and SM8 models for predicting solvation free energy of neutral solutes in methanol, dimethyl sulfoxide and acetonitrile
CC Zanith, JR Pliego - Journal of computer-aided molecular design, 2015 - Springer
The continuum solvation models SMD and SM8 were developed using 2,346 solvation free
energy values for 318 neutral molecules in 91 solvents as reference. However, no solvation …
energy values for 318 neutral molecules in 91 solvents as reference. However, no solvation …
Accuracy of computational solvation free energies for neutral and ionic compounds: Dependence on level of theory and solvent model
S Rayne, K Forest - Nature Precedings, 2010 - nature.com
Gas to aqueous phase standard state (1 atm to 1 mol/L; 298.15 K) free energies of solvation
([DELTA] G^ o^~ solv~) were calculated for a range of neutral and ionic inorganic and …
([DELTA] G^ o^~ solv~) were calculated for a range of neutral and ionic inorganic and …
A partition coefficient calculation method with the SFED model
Y In, HH Chai, KT No - Journal of chemical information and …, 2005 - ACS Publications
The Solvation Free Energy Density (SFED) model, a solvation model proposed by No et al.
was modified to give better solvation free energies of the molecules having high polarizable …
was modified to give better solvation free energies of the molecules having high polarizable …
Solvation free energies for aqueous and nonaqueous solutions computed using PM7 atomic charges
SF Vyboishchikov, AA Voityuk - Journal of Chemical Information …, 2021 - ACS Publications
We describe a simple and accurate method, ESE-PM7, for calculating solvation free
energies Δ G solv° in aqueous and nonaqueous solutions. The method is based on a …
energies Δ G solv° in aqueous and nonaqueous solutions. The method is based on a …
Surveying implicit solvent models for estimating small molecule absolute hydration free energies
JL Knight, CL Brooks III - Journal of computational chemistry, 2011 - Wiley Online Library
Implicit solvent models are powerful tools in accounting for the aqueous environment at a
fraction of the computational expense of explicit solvent representations. Here, we compare …
fraction of the computational expense of explicit solvent representations. Here, we compare …