Motivation: The increasing availability of gene expression microarray technology has
resulted in the publication of thousands of microarray gene expression datasets …

In recent years, multiple types of high-throughput functional genomic data that facilitate rapid
functional annotation of sequenced genomes have become available. Gene expression …

Background Although expression microarrays have become a standard tool used by
biologists, analysis of data produced by microarray experiments may still present …

Gene expression microarrays provide a snapshot of all the transcriptional activity in a
biological sample. Unlike most traditional molecular biology tools, which generally allow the …

Background Gene expression microarrays are a prominent experimental tool in functional
genomics which has opened the opportunity for gaining global, systems-level understanding …

Abstract The Gene Expression Omnibus (GEO) at the National Center for Biotechnology
Information (NCBI) has emerged as the leading fully public repository for gene expression …

We present SEEK (search-based exploration of expression compendia; http://seek.
princeton. edu/), a query-based search engine for very large transcriptomic data collections …

The immense volume of data resulting from DNA microarray experiments, accompanied by
an increase in the number of publications discussing gene-related discoveries, presents a …

Background The rapidly expanding fields of genomics and proteomics have prompted the
development of computational methods for managing, analyzing and visualizing expression …

Background The biomedical community is rapidly developing new methods of data analysis
for microarray experiments, with the goal of establishing new standards to objectively …