… and healthy TA in our transcriptome-wide analysis. PDK4, … used to identify splicing factors
co-expressed in single cells … the challenges of isoform quantification caused by 3’ bias, low …

… of AML cells, with RG3039, and performed RNA sequencing (RNA-seq) to determine
potential transcriptome-wide splicing changes (Figure 4A). Of note, CETSA analysis showed …

… splicing is observed in several neurological and psychiatric disorders. While exonic mutations
usually affect the splicing of an individual RNA, mutations in the splicing … below brie y …

… the analysis of alternative splicing — a crucial but overlooked step in gene regulation — from
short-read single-cell … Instead of using single cells as replicates, we partitioned the BICCN …

… single cells from adult human prefrontal cortex (24), we assembled a cell type–specific
reference panel for seven major brain cell … brain expression and splicing quantitative trait locus (…

… Transcriptome-wide … 2,800 single cells, identifying thousands of cell-speci c novel isoforms
and di erential isoform usage between cell lines for genes enriched in mRNA splicing and cell…

… Brie y, this work ow maps reads to each species’ reference genome (obtained from Ensembl
Plants … Transcriptome-wide analysis of pseudouridylation of mRNA and non-coding RNAs in …

… splicing variants with the genetic patterns from different regions of the brain in normal individuals
to identify quantitative … of individual cells, reveal complex and novel cell populations that …

… analysis functions based on GSEA and GSVA. (iv) We adopted the snakemake analysis
pipeline to track data processing and analysis. … variety of enrichment analysis modules, assisting …

… arise from a single cell, which is known as the monoclonal origin of tumors. However, there
… has been studied using RNA-sequencing, which enables transcriptome-wide profiling of the …