… useful genes which were lost during the crop domestication … pan-genome data, public
genomic portals hosting pan-genes, … from 11 assembled allopolyploid cotton genomes and are …

… Finally, we selected all the SNPs that were specific to the heat stress-… of Asian domesticated
rice cultivars [56]. The number of … (2021) on the cotton pan-genome, identified significantly …

… mutations, such as amino acid changes, loss of start sites or … and positive selection, we
found more gene families related … , which may reflect its short domestication history. Functional …

… , we need to construct a pan-genome (the collection of all DNA 65 sequences for a species)
for … pan-genome retrieves the lost sequences and genes during domestication and selection. …

… and abiotic stresses throughout domestication and breeding … gene content in cotton from
24.14% to 23.48% (Table 1). … , just like most domesticated crops, intensive selection has …

… genetic patterns of genetic improvement in upland cotton … years of domestication and artificial
selection have altered cotton … Summary of genomic sequencing data of 890 cottons in this …

… Crop domestication and artificial selection have paved the … urgency for a new reference
pan-genome at the genus-level … -based pan-genome and GWAS of allotetraploid cotton retrieved …

… -based cotton pan-genome detected new valuable genes … In this study, we annotated
sequences of 13,138 PAVs, 6076 … , we inferred that at least three rounds of selection for hereditary …

… for upland cotton accessions on the domestication spectrum (… to the loss of VW resistance
in cotton during breeding efforts. … loss occurred during human selection of upland cotton, as …

… technology provides powerful tools for enhancing genetic diversity and trait selection in cotton.
High… sequencing has highlighted the loss of genetic diversity during cotton domestication. …