Ensembl 2022
… history of Ensembl via our dedicated Ensembl Rapid Release platform ( http://rapid.ensembl.…
We have a range of specific software tools for specific tasks, such as the Ensembl Variant …
We have a range of specific software tools for specific tasks, such as the Ensembl Variant …
Ensembl Genomes 2022: an expanding genome resource for non-vertebrates
AD Yates, J Allen, RM Amode, AG Azov… - Nucleic acids …, 2022 - academic.oup.com
… in Ensembl Genomes. Our efforts to merge Ensembl and Ensembl Genomes resources
continues within the context of Ensembl's new infrastructure and website project (https://2020.…
continues within the context of Ensembl's new infrastructure and website project (https://2020.…
Ensembl 2023
FJ Martin, MR Amode, A Aneja… - Nucleic acids …, 2023 - academic.oup.com
… and applications that utilise the Ensembl platform. In recent … , it is our goal at Ensembl to
create high-quality annotations, … graphs), updates to the Ensembl Variant Effect Predictor (VEP…
create high-quality annotations, … graphs), updates to the Ensembl Variant Effect Predictor (VEP…
Ensembl 2021
… , specialist tools such as the Ensembl Variant Effect Predictor, download files … Ensembl
developments including two new website portals. Ensembl Rapid Release (http://rapid.ensembl.…
developments including two new website portals. Ensembl Rapid Release (http://rapid.ensembl.…
Ensembl 2020
… The Ensembl annotation pipeline is capable of integrating experimental and reference data
… , bringing the total number of genomes offered by Ensembl to 227. This represents the single …
… , bringing the total number of genomes offered by Ensembl to 227. This represents the single …
Ensembl 2018
DR Zerbino, P Achuthan, W Akanni… - Nucleic acids …, 2018 - academic.oup.com
… Second, we cover a growing number of genome assemblies; Ensembl Release 90 contains
… We present here the latest developments of the Ensembl project, with a focus on managing …
… We present here the latest developments of the Ensembl project, with a focus on managing …
Ensembl 2019
F Cunningham, P Achuthan, W Akanni… - Nucleic acids …, 2019 - academic.oup.com
… In addition, we updated the Ensembl/GENCODE annotation for mouse and annotated the …
in Ensembl. These data were integrated into the mouse version of the Ensembl Regulatory …
in Ensembl. These data were integrated into the mouse version of the Ensembl Regulatory …
Ensembl Genomes 2020—enabling non-vertebrate genomic research
KL Howe, B Contreras-Moreira, N De Silva… - Nucleic acids …, 2020 - academic.oup.com
… place even greater demands on both Ensembl and Ensembl Genomes as we seek to provide
… With this in mind, the public REST APIs of Ensembl and Ensembl Genomes have already …
… With this in mind, the public REST APIs of Ensembl and Ensembl Genomes have already …
Ensembl 2024
PW Harrison, MR Amode… - Nucleic acids …, 2024 - academic.oup.com
… support food security research with the first Ensembl regulatory builds, beyond human
and … our suite of Ensembl tools, most notably with improvements to the Ensembl Variant Effect …
and … our suite of Ensembl tools, most notably with improvements to the Ensembl Variant Effect …
Generation of ENSEMBL-based proteogenomics databases boosts the identification of non-canonical peptides
We have implemented the pypgatk package and the pgdb workflow to create proteogenomics
databases based on ENSEMBL resources. The tools allow the generation of protein …
databases based on ENSEMBL resources. The tools allow the generation of protein …