Homeodomain-DNA recognition
WJ Gehring, YQ Qian, M Billeter… - Cell, 1994 - Elsevier
… The overall arrangement of the three homeodomainDNA complexes is quite similar (Figure
1). Helices I and II are aligned in an antiparallel arrangement above the DNA, each spanning the …
1). Helices I and II are aligned in an antiparallel arrangement above the DNA, each spanning the …
Exploring the DNA-recognition potential of homeodomains
SW Chu, MB Noyes, RG Christensen… - Genome …, 2012 - genome.cshlp.org
… HD recognition, allowing the creation of more explicit recognition models for this family. The
potential for this domain to recognize … recognition properties for this family in natural systems. …
potential for this domain to recognize … recognition properties for this family in natural systems. …
Homeodomain proteins: what governs their ability to recognize specific DNA sequences?
A Draganescu, JR Levin, TD Tullius - Journal of molecular biology, 1995 - Elsevier
… specificity between homeodomains with similar recognition helices. We have employed …
of other homeodomain/DNA complexes. Dfd and Ubx bind to DNA with the recognition helix in …
of other homeodomain/DNA complexes. Dfd and Ubx bind to DNA with the recognition helix in …
[HTML][HTML] A lexicon for homeodomain-DNA recognition
… We describe the comprehensive characterization of homeodomain DNA-binding specificities
from a metazoan genome. The analysis of all 84 independent homeodomains from D. …
from a metazoan genome. The analysis of all 84 independent homeodomains from D. …
A genetic model for interaction of the homeodomain recognition helix with DNA
SD Hanes, R Brent - Science, 1991 - science.org
… the Gin at position 9 mutant proteins were apparently specifically ates a hydrogen bond
defective in homeodomain-DNA binding; ;en bond from N6 of they were stably expressed, as …
defective in homeodomain-DNA binding; ;en bond from N6 of they were stably expressed, as …
Molecular dynamics analysis of the engrailed homeodomain–DNA recognition
X Zhao, X Huang, C Sun - Journal of structural biology, 2006 - Elsevier
… role of Gln50 in the engrailed homeodomain–DNA recognition. Employing the crystal structure
of free engrailed homeodomain and homeodomain–DNA complex as a starting structure, …
of free engrailed homeodomain and homeodomain–DNA complex as a starting structure, …
A molecular code dictates sequence‐specific DNA recognition by homeodomains.
… recognition of the nucleotide at the 3' end of the core motif 5'NAAN-3'. The nucleotide at the 5'
position of this core sequence is recognized by … involved in DNA recognition do not follow a …
position of this core sequence is recognized by … involved in DNA recognition do not follow a …
Reprogrammable recognition codes in bicoid homeodomain-DNA interaction
V Dave, C Zhao, F Yang, CS Tung… - Molecular and cellular …, 2000 - Taylor & Francis
… helix, which inserts itself into the major groove of the recognition site. In addition, the flexible
… contributing to specific homeodomain-DNA interactions. The recognition sites for most …
… contributing to specific homeodomain-DNA interactions. The recognition sites for most …
Cooperative Ordering in Homeodomain− DNA Recognition: Solution Structure and Dynamics of the MAT a 1 Homeodomain
JS Anderson, MD Forman, S Modleski… - Biochemistry, 2000 - ACS Publications
… Transcription factors containing the homeodomain DNA-binding motif have been found in
… of homeodomain−DNA complexes have revealed a general model of DNA recognition ( 12) …
… of homeodomain−DNA complexes have revealed a general model of DNA recognition ( 12) …
Crystal structure of an engrailed homeodomain-DNA complex at 2.8 Å resolution: a framework for understanding homeodomain-DNA interactions
CR Kissinger, B Liu, E Martin-Blanco, TB Kornberg… - Cell, 1990 - cell.com
… Although the homeodomain-DNA … In this section we try to place the homeodomain-DNA …
We discuss the role of a helices in recognition and discuss the respective roles of contacts with …
We discuss the role of a helices in recognition and discuss the respective roles of contacts with …
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