The genome of Lyophyllum shimeji provides insight into the initial evolution of ectomycorrhizal fungal genomes

Y Kobayashi, TF Shibata, H Hirakawa… - DNA …, 2023 - academic.oup.com
Mycorrhizae are one of the most fundamental symbioses between plants and fungi, with
ectomycorrhizae being the most widespread in boreal forest ecosystems. Ectomycorrhizal fungi …

High diversity of fungi recovered from the roots of mature tanoak (Lithocarpus densiflorus) in northern California

SE Bergemann, M Garbelotto - Botany, 2006 - cdnsciencepub.com
… Thirty-one of the ascomycete sequences were identified as Cenococcum geophilum Fr. with
overall richness of 22 ITS types. Other ascomycetes that form mycorrhizal associations were …

Variation in the ribosomal DNA internal transcribed spacer of a diverse collection of ectomycorrhizal fungi

DJ Farmer, DM Sylvia - Mycological Research, 1998 - Elsevier
… Intraspecific variation was observed in Cenococcum geophilum and Pisolithus arhizus, …
Cultures of Cenococcum geophilum were grown on potato dextrose agar (DIFCO, Detroit, MI). All …

[HTML][HTML] Genome size analyses of Pucciniales reveal the largest fungal genomes

S Tavares, AP Ramos, AS Pires, HG Azinheira… - Frontiers in plant …, 2014 - frontiersin.org
… were created in the FL histogram to gate the nuclei and obtain descriptive statistics of
each peak, including number of nuclei, mean channel position and coefficient of variation (CV). …

RNA reveals a succession of active fungi during the decay of Norway spruce logs

T Rajala, M Peltoniemi, J Hantula, R Mäkipää… - Fungal Ecology, 2011 - Elsevier
Copy number variation among fungal species may be extensive compared to that of …
methods may be largely due to unpredictable variation in copy number, as well as PCR and …

Nitrogen and drought effects on ectomycorrhizae of Norway spruce [Picea abies L.(Karst.)]

P Nilsen, I Børja, H Knutsen, R Brean - Plant and Soil, 1998 - Springer
Cenococcum geophilum was the prevalent type of mycorrhiza in our study. It is often …
geophilum was the only mycorrhiza type significantly affected by the drought. Closer analysis of this …

Impacts of conversion from natural forest to cedar plantation on the structure and diversity of root-associated and soil microbial communities

K Sawada, Y Inagaki, S Sugihara, S Funakawa… - Applied Soil …, 2021 - Elsevier
… The measurements were expressed as copy numbers on an oven-dry soil weight basis (105 …
tree roots associated with ECM such as Cenococcum geophilum, Tuber spp., Piloderma spp…

Temporal changes in the ectomycorrhizal community in two soil horizons of a temperate oak forest

PE Courty, A Franc, JC Pierrat… - Applied and …, 2008 - Am Soc Microbiol
… site: Lactarius quietus, Tomentella sublilacina, Cenococcum geophilum, and Russula sp1.
The … geophilum was located particularly in the A2 horizon, whereas T. sublilacina was more …

Fungal community shifts underpin declining mycelial production and turnover across a Pinus sylvestris chronosequence

A Hagenbo, J Kyaschenko, KE Clemmensen… - Journal of …, 2018 - Wiley Online Library
copy number of each fungal functional group was estimated by multiplying total ITS2 copy
numbers … increase up to 97 days, Cenococcum geophilum, Amphinema sp., Tomentellopsis …

Two-speed genome evolution drives pathogenicity in fungal pathogens of animals

T Wacker, N Helmstetter, D Wilson… - Proceedings of the …, 2023 - National Acad Sciences
… of LINEs that are implicated with gene copy number variations. Additionally, Bsal has a highly
… , Phytophthora infestans, and the symbiotic fungus Cenococcum geophilum (55–58). TEs …