Methylation QTLs in the developing brain and their enrichment in schizophrenia risk loci

E Hannon, H Spiers, J Viana, R Pidsley, J Burrage… - Nature …, 2016 - nature.com
… in DNA methylation across human fetal brain development 6 , … human brain 7,8 , have shown
that DNA methylation can be … human brain using low-resolution DNA methylation arrays 7,…

The future is the past: methylation QTLs in schizophrenia

A Hoffmann, M Ziller, D Spengler - Genes, 2016 - mdpi.com
… diseased brainmethylation and meQTLs in fetal brains and how this integrated knowledge
could inform about epigenomic deregulation during vulnerable periods of brain development

Methylation quantitative trait loci (meQTLs) are consistently detected across ancestry, developmental stage, and tissue type

AK Smith, V Kilaru, M Kocak, LM Almli, KB Mercer… - BMC genomics, 2014 - Springer
… , which vary based on ancestry, or the variance of methylation at a specific CpG site, which
may differ across stages of development or tissue type. These SNP-CpG relationships have …

Abundant quantitative trait loci exist for DNA methylation and gene expression in human brain

JR Gibbs, MP Van Der Brug, DG Hernandez… - PLoS …, 2010 - journals.plos.org
… CpG methylation across the genome. We show peak enrichment for cis expression QTLs to
… multiple brain regions and also to QTLs linked to CpG methylation, we plotted all significant …

Genome-wide mapping of genetic determinants influencing DNA methylation and gene expression in human hippocampus

H Schulz, AK Ruppert, S Herms, C Wolf… - Nature …, 2017 - nature.com
… The epilepsy status thus appears to exert only marginal effects on CpG methylation and
gene expression in the QTLs identified in the present study. However, the epilepsy status or …

Mapping DNA methylation across development, genotype and schizophrenia in the human frontal cortex

AE Jaffe, Y Gao, A Deep-Soboslay, R Tao… - Nature …, 2016 - nature.com
development in the human brain than was previously available. Although previous efforts to
comprehensively measure DNA methylation … important features of brain development 16 , …

Genetic control of individual differences in gene-specific methylation in human brain

D Zhang, L Cheng, JA Badner, C Chen, Q Chen… - The American Journal of …, 2010 - cell.com
… with both DNA methylation and gene expression, while DNA methylation was significantly
methylation is frequently a heritable continuous quantitatively variable trait in human brain. …

DNA methylation QTL mapping across diverse human tissues provides molecular links between genetic variation and complex traits

M Oliva, K Demanelis, Y Lu, M Chernoff, F Jasmine… - Nature …, 2023 - nature.com
… their effects to those of eQTLs, we performed QTL-GWAS colocalization by integrating FDR
< 0.05 QTLs with 83 GWAS datasets that had at least one QTL-overlapping GWAS hit (P < 5 × …

Genome-wide sequencing-based identification of methylation quantitative trait loci and their role in schizophrenia risk

KA Perzel Mandell, NJ Eagles, R Wilton… - Nature …, 2021 - nature.com
… Genome-wide gene expression QTL (eQTL) approaches 18,19 , and their extensions 20,21,…
be more prominent, particularly in the developing brain 28 . The interplay between sequence …

Role of DNA methylation in mediating genetic risk of psychiatric disorders

A Starnawska, D Demontis - Frontiers in Psychiatry, 2021 - frontiersin.org
… differential DNA methylation in genes involved in fetal brain development and neurogenesis
to … Methylation QTLs are associated with coordinated changes in transcription factor binding, …