Resolving Phylogenetic Relationships for Streptococcus mitis and Streptococcus oralis through Core- and Pan-Genome Analyses
IM Velsko, MS Perez, VP Richards - Genome biology and …, 2019 - academic.oup.com
… We investigated whether pan-genome content could explain species misassignment in S.
mitis and S. oralis, which is potentially related to biochemical characterization of these species…
mitis and S. oralis, which is potentially related to biochemical characterization of these species…
[HTML][HTML] Structure and dynamics of the pan-genome of Streptococcus pneumoniae and closely related species
… phylogenetic analysis, S. pneumoniae is very similar to commensal species of the Mitis
group, in particular Streptococcus mitis, Streptococcus oralis and Streptococcus infantis [1]. …
group, in particular Streptococcus mitis, Streptococcus oralis and Streptococcus infantis [1]. …
Whole genome sequencing as a tool for phylogenetic analysis of clinical strains of Mitis group streptococci
LH Rasmussen, R Dargis, K Højholt… - European Journal of …, 2016 - Springer
… genome sequence (WGS) analysis feasible. With … (pan-genome) in a phylogenetic analysis
or simply focusing on genes present in all strains (core-genome) [38]. Phylogenetic analysis …
or simply focusing on genes present in all strains (core-genome) [38]. Phylogenetic analysis …
Exploring the Genomic Diversity and Cariogenic Differences of Streptococcus mutans Strains Through Pan-Genome and Comparative Genome Analysis
… mutans) isolates were analyzed from the pan-genome perspective. This analysis revealed
that S. mutans has an “open” pan-genome, implying that there are plenty of new genes to be …
that S. mutans has an “open” pan-genome, implying that there are plenty of new genes to be …
Identification of virulence-associated properties by comparative genome analysis of Streptococcus pneumoniae, S. pseudopneumoniae, S. mitis, three S. oralis …
M Kilian, H Tettelin - MBio, 2019 - Am Soc Microbiol
… From a common ancestor, Streptococcus pneumoniae and Streptococcus mitis evolved
in parallel into one of the most important pathogens and a mutualistic colonizer of humans, …
in parallel into one of the most important pathogens and a mutualistic colonizer of humans, …
[PDF][PDF] In silico assessment of virulence factors in strains of Streptococcus oralis and Streptococcus mitis isolated from patients with Infective Endocarditis
XC Nielsen - researchgate.net
… A presence-absence gene matrix based on the pan-genome of 40 clinical S. mitis and S.
oralis strains was constructed in order to gain an impression of co-existing genes among the …
oralis strains was constructed in order to gain an impression of co-existing genes among the …
[HTML][HTML] A pangenome approach for discerning species-unique gene markers for identifications of Streptococcus pneumoniae and Streptococcus pseudopneumoniae
L Gonzales-Siles, R Karlsson, P Schmidt… - Frontiers in cellular …, 2020 - frontiersin.org
… unique genomic markers, using pangenome analyses, for reliable differentiation and … mitis,
which is the next most-closely related species of the Mitis-Group of the genus Streptococcus, …
which is the next most-closely related species of the Mitis-Group of the genus Streptococcus, …
[HTML][HTML] Distinct Biological Potential of Streptococcus gordonii and Streptococcus sanguinis Revealed by Comparative Genome Analysis
W Zheng, MF Tan, LA Old, IC Paterson… - Scientific reports, 2017 - nature.com
… the pan-genome analysis. We compared the core genes of Sg and Ss and found they
shared a large set of gene families (1,372), reflecting a high similarity between the two species. …
shared a large set of gene families (1,372), reflecting a high similarity between the two species. …
A new perspective on ancient Mitis group streptococcal genetics
… The Streptococcus Mitis group of Viridans streptococci are bacteria which typically inhabit …
Structure and dynamics of the pan-genome of Streptococcus pneumoniae and closely related …
Structure and dynamics of the pan-genome of Streptococcus pneumoniae and closely related …
Sequencing and Comparative Genome Analysis of Streptococcus Sanguinis and Streptococcus Gordonii
Z Wenning - 2017 - search.proquest.com
… As the pan-genome analysis study suggested the plasticity of the Streptococcus genomes, I
… Additionally, they successfully classified the species of oral streptococci Mitis group into the …
… Additionally, they successfully classified the species of oral streptococci Mitis group into the …
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