Genome-wide identification and functional prediction of cold and/or drought-responsive lncRNAs in cassava

S Li, X Yu, N Lei, Z Cheng, P Zhao, Y He, W Wang… - Scientific reports, 2017 - nature.com
Cold and drought stresses seriously affect cassava (Manihot esculenta) plant growth and
yield. Recently, long noncoding RNAs (lncRNAs) have emerged as key regulators of diverse …

Long noncoding RNA lncRNA354 functions as a competing endogenous RNA of miR160b to regulate ARF genes in response to salt stress in upland cotton

X Zhang, J Shen, Q Xu, J Dong, L Song… - Plant, Cell & …, 2021 - Wiley Online Library
Long non‐coding RNAs (lncRNAs) play important roles in response to biotic and abiotic
stress through acting as competing endogenous RNAs (ceRNAs) to decoy mature miRNAs …

Cotton leaf curl Multan virus-derived viral small RNAs can target cotton genes to promote viral infection

J Wang, Y Tang, Y Yang, N Ma, X Ling, J Kan… - Frontiers in plant …, 2016 - frontiersin.org
RNA silencing is a conserved mechanism in plants that targets viruses. Viral small RNAs
(vsiRNAs) can be generated from viral double-stranded RNA replicative intermediates within …

Comparative transcriptome analysis of Gossypium hirsutumL. in response to sap sucking insects: aphid and whitefly

NK Dubey, R Goel, A Ranjan, A Idris, SK Singh… - BMC genomics, 2013 - Springer
Abstract Background Cotton (Gossypium hirsutum L.) is a major fiber crop that is grown
worldwide; it faces extensive damage from sap-sucking insects, including aphids and …

Systematic analysis of NAC transcription factors in Gossypium barbadense uncovers their roles in response to Verticillium wilt

Z Liu, M Fu, H Li, Y Chen, L Wang, R Liu - PeerJ, 2019 - peerj.com
As one of the largest plant-specific gene families, the NAC transcription factor gene family
plays important roles in various plant physiological processes that are related to plant …

lncRNA in plants: Function, mechanisms and applications

J Cui - Frontiers in Plant Science, 2023 - frontiersin.org
Up to 90% of genomes is estimated to be transcribed in eukaryotes, but only 2% of
transcribed RNAs will code for proteins. The non-coding genome, also dubbed as the “dark …

From “dark matter” to “star”: insight into the regulation mechanisms of plant functional long non-coding RNAs

Q Chen, K Liu, R Yu, B Zhou, P Huang, Z Cao… - Frontiers in Plant …, 2021 - frontiersin.org
Long non-coding RNAs (lncRNAs) play a vital role in a variety of biological functions in plant
growth and development. In this study, we provided an overview of the molecular …

Genome-wide analysis of cotton miRNAs during whitefly infestation offers new insights into plant-herbivore interaction

J Li, JJ Hull, S Liang, Q Wang, L Chen… - International journal of …, 2019 - mdpi.com
Although the regulatory function of miRNAs and their targets have been characterized in
model plants, a possible underlying role in the cotton response to herbivore infestation has …

Genome-Wide Identification and Characterization of Long Non-Coding RNA in Wheat Roots in Response to Ca2+ Channel Blocker

K Ma, W Shi, M Xu, J Liu, F Zhang - Frontiers in Plant Science, 2018 - frontiersin.org
It remains unclear whether plant lncRNAs are responsive to Ca2+-channel blocking. When
using the Ca2+-channel blocker, LaCl3, to treat germinated wheat seeds for 24 h, we found …

Genome-Wide Identification of the NAC Transcription Factors in Gossypium hirsutum and Analysis of Their Responses to Verticillium wilt

S Bai, Q Niu, Y Wu, K Xu, M Miao, J Mei - Plants, 2022 - mdpi.com
The NAC transcription factors (NACs) are among the largest plant-specific gene regulators
and play essential roles in the transcriptional regulation of both biotic and abiotic stress …