Genome-wide analysis of long non-coding RNAs (lncRNAs) in two contrasting rapeseed (Brassica napus L.) genotypes subjected to drought stress and re-watering

X Tan, S Li, L Hu, C Zhang - BMC plant biology, 2020 - Springer
Background Drought stress is a major abiotic factor that affects rapeseed (Brassica napus L.)
productivity. Though previous studies indicated that long non-coding RNAs (lncRNAs) play a …

Identification and characterization of wheat long non-protein coding RNAs responsive to powdery mildew infection and heat stress by using microarray analysis and …

M Xin, Y Wang, Y Yao, N Song, Z Hu, D Qin, C Xie… - BMC plant biology, 2011 - Springer
Background Biotic and abiotic stresses, such as powdery mildew infection and high
temperature, are important limiting factors for yield and grain quality in wheat production …

The applications of CRISPR/Cas-mediated microRNA and lncRNA editing in plant biology: shaping the future of plant non-coding RNA research

LA Bravo-Vázquez, A Méndez-García, V Chamu-García… - Planta, 2024 - Springer
Main conclusion CRISPR/Cas technology has greatly facilitated plant non-coding RNA
(ncRNA) biology research, establishing itself as a promising tool for ncRNA functional …

Deep sequencing reveals important roles of microRNAs in response to drought and salinity stress in cotton

F Xie, Q Wang, R Sun, B Zhang - Journal of experimental botany, 2015 - academic.oup.com
Drought and salinity are two major environmental factors adversely affecting plant growth
and productivity. However, the regulatory mechanism is unknown. In this study, the potential …

Identification and functional characterization of intermediate-size non-coding RNAs in maize

D Li, H Qiao, W Qiu, X Xu, T Liu, Q Jiang, R Liu, Z Jiao… - BMC genomics, 2018 - Springer
Background The majority of eukaryote genomes can be actively transcribed into non-coding
RNAs (ncRNAs), which are functionally important in development and evolution. In the study …

PLncPRO for prediction of long non-coding RNAs (lncRNAs) in plants and its application for discovery of abiotic stress-responsive lncRNAs in rice and chickpea

U Singh, N Khemka, MS Rajkumar, R Garg… - Nucleic acids …, 2017 - academic.oup.com
Long non-coding RNAs (lncRNAs) make up a significant portion of non-coding RNAs and
are involved in a variety of biological processes. Accurate identification/annotation of …

Genome-wide analysis of long non-coding RNAs responsive to multiple nutrient stresses in Arabidopsis thaliana

J Wang, Q Chen, W Wu, Y Chen, Y Zhou, G Guo… - Functional & integrative …, 2021 - Springer
Nutrient stress is the most important environmental stress that limits plant growth and
development. Although recent evidence highlights the vital functions of long non-coding …

Genome-Wide Identification of lncRNAs and Analysis of ceRNA Networks During Tomato Resistance to Phytophthora infestans

J Cui, N Jiang, X Hou, S Wu, Q Zhang… - …, 2020 - Am Phytopath Society
Our previous studies have revealed the function of long noncoding RNAs (lncRNAs) and
microRNAs (miRNAs) in tomato in response to Phytophthora infestans infection. However …

Identification and characterization of long non-coding RNAs involved in osmotic and salt stress in Medicago truncatula using genome-wide high-throughput …

TZ Wang, M Liu, MG Zhao, R Chen, WH Zhang - BMC plant biology, 2015 - Springer
Abstract Background Long non-coding RNAs (lncRNAs) have been shown to play crucially
regulatory roles in diverse biological processes involving complex mechanisms. However …

Functional analysis of long non-coding RNAs involved in alkaline stress responses in wheat

L Wei, R Zhang, M Zhang, G Xia… - Journal of Experimental …, 2022 - academic.oup.com
Saline-alkali soil is a major environmental problem affecting crop productivity. One of the
most effective approaches to combat it is to breed stress-tolerant plants through genetic …