[HTML][HTML] Thousands of exon skipping events differentiate among splicing patterns in sixteen human tissues
Alternative splicing is widely recognized for its roles in regulating genes and creating gene
diversity. However, despite many efforts, the repertoire of gene splicing variation is still …
diversity. However, despite many efforts, the repertoire of gene splicing variation is still …
PrimerSeq: design and visualization of RT-PCR primers for alternative splicing using RNA-seq data
The vast majority of multi-exon genes in higher eukaryotes are alternatively spliced and
changes in alternative splicing (AS) can impact gene function or cause disease. High …
changes in alternative splicing (AS) can impact gene function or cause disease. High …
Expression and splicing mediate distinct biological signals
Background Through alternative splicing, most human genes produce multiple isoforms in a
cell-, tissue-, and disease-specific manner. Numerous studies show that alternative splicing …
cell-, tissue-, and disease-specific manner. Numerous studies show that alternative splicing …
[HTML][HTML] Single-cell and long-read sequencing to enhance modelling of splicing and cell-fate determination
Single-cell sequencing technologies have revolutionised the life sciences and biomedical
research. Single-cell sequencing provides high-resolution data on cell heterogeneity …
research. Single-cell sequencing provides high-resolution data on cell heterogeneity …
Alternative splicing and isoforms: from mechanisms to diseases
Q Liu, L Fang, C Wu - Genes, 2022 - mdpi.com
Alternative splicing of pre-mRNA is a key mechanism for increasing the complexity of
proteins in humans, causing a diversity of expression of transcriptomes and proteomes in a …
proteins in humans, causing a diversity of expression of transcriptomes and proteomes in a …
The usage of exon-exon splice junctions for the detection of alternative splicing using the REIDS model
M Van Moerbeke, A Kasim, Z Shkedy - Scientific Reports, 2018 - nature.com
Alternative gene splicing is a common phenomenon in which a single gene gives rise to
multiple transcript isoforms. The process is strictly guided and involves a multitude of …
multiple transcript isoforms. The process is strictly guided and involves a multitude of …
A comprehensive benchmarking of differential splicing tools for RNA-seq analysis at the event level
M Jiang, S Zhang, H Yin, Z Zhuo… - Briefings in …, 2023 - academic.oup.com
RNA alternative splicing, a post-transcriptional stage in eukaryotes, is crucial in cellular
homeostasis and disease processes. Due to the rapid development of the next-generation …
homeostasis and disease processes. Due to the rapid development of the next-generation …
The physiology of alternative splicing
LE Marasco, AR Kornblihtt - Nature Reviews Molecular Cell Biology, 2023 - nature.com
Alternative splicing is a substantial contributor to the high complexity of transcriptomes of
multicellular eukaryotes. In this Review, we discuss the accumulated evidence that most of …
multicellular eukaryotes. In this Review, we discuss the accumulated evidence that most of …
[HTML][HTML] Differential splicing analysis based on isoforms expression with NBSplice
GA Merino, EA Fernández - Journal of biomedical informatics, 2020 - Elsevier
Alternative splicing alterations have been widely related to several human diseases
revealing the importance of their study for the success of translational medicine. Differential …
revealing the importance of their study for the success of translational medicine. Differential …
Regulation of alternative splicing at the single‐cell level
L Faigenbloom, ND Rubinstein, Y Kloog… - Molecular Systems …, 2015 - embopress.org
Alternative splicing is a key cellular mechanism for generating distinct isoforms, whose
relative abundances regulate critical cellular processes. It is therefore essential that …
relative abundances regulate critical cellular processes. It is therefore essential that …