Transcriptional regulatory elements in the human genome

GA Maston, SK Evans, MR Green - Annu. Rev. Genomics Hum …, 2006 - annualreviews.org
… Recent findings with an interesting class of silencing elements, known as Polycomb group
Response Elements (PREs), may shed light on this issue. PREs act as either silencers or …

Defining functional DNA elements in the human genome

M Kellis, B Wold, MP Snyder… - Proceedings of the …, 2014 - National Acad Sciences
… The fraction of the human genome covered by ENCODE-detected elements in at least one
… All percentages are calculated against the whole genome, including the portion that is not …

Identification of polymorphic antioxidant response elements in the human genome

X Wang, DJ Tomso, BN Chorley, HY Cho… - Human molecular …, 2007 - academic.oup.com
… a fully assembled human genome sequence, large-scale genotyping and gene expression
… detect functional SNPs in TFBSs in the human genome and to predict their impact on the …

[HTML][HTML] An integrated encyclopedia of DNA elements in the human genome

ENCODE Project Consortium - Nature, 2012 - ncbi.nlm.nih.gov
… The Encyclopedia of DNA Elements (ENCODE) Project aims to … elements encoded in
the human genome 1–3 . Operationally, we define a functional element as a discrete genome

Interferon response element of the human gene 6‐16.

AC Porter, Y Chernajovsky, TC Dale, CS Gilbert… - The EMBO …, 1988 - embopress.org
genomic DNA spanning the first exon of the human alpha/beta‐interferon (IFN)‐inducible
gene … These results identify an alpha/beta IFN response element partially homologous to those …

Genome-wide identification of high-affinity estrogen response elements in human and mouse

V Bourdeau, J Deschênes, R Métivier… - Molecular …, 2004 - academic.oup.com
… of EREs (71,119 in the human genome, or about one in every 43 kb of genomic DNA). Not
… We have calculated that the number of EREs found in the human genome in the −1 to + 2-…

Finding distal regulatory elements in the human genome

ND Heintzman, B Ren - Current opinion in genetics & development, 2009 - Elsevier
elements, which are often located far away from the genes they control. Our knowledge of
human distal regulatory elements … regulatory sequences throughout the human genome. Here, …

Retroelements and the human genome: new perspectives on an old relation

N Bannert, R Kurth - … of the National Academy of Sciences, 2004 - National Acad Sciences
Retroelements constitute a large portion of our genomes. One class of these elements, the
human endogenous retroviruses (HERVs), is comprised of remnants of ancient exogenous …

Ultraconserved elements in the human genome

G Bejerano, M Pheasant, I Makunin, S Stephen… - Science, 2004 - science.org
… We determined the longest segments of the human genome that are maximally conserved …
we call ultraconserved elements (table S1). They are widely distributed in the genome (on all …

Investigating the potential roles of SINEs in the human genome

XO Zhang, H Pratt, Z Weng - … review of genomics and human …, 2021 - annualreviews.org
response elements facilitate the exaptation of SINEs to provide a wide variety of regulatory
elements to the human genome, … gene regulation by changing chromatin structure across the …