[HTML][HTML] One year into the pandemic: Short-term evolution of SARS-CoV-2 and emergence of new lineages
F González-Candelas, MA Shaw, T Phan… - … , Genetics and Evolution, 2021 - Elsevier
… virus has been tracked nearly in real-time by worldwide genome sequencing efforts. As of
March 2021, more than 830,000 SARS-CoV-2 … study the evolution of SARS-CoV-2 during this …
March 2021, more than 830,000 SARS-CoV-2 … study the evolution of SARS-CoV-2 during this …
[HTML][HTML] The evolution of SARS-CoV-2
… playing a role in SARS-CoV-2 evolution, and conclude that the … the possible future evolutionary
trajectories of SARS-CoV-2. … reduce virulence as the virus adapts long term to its host …
trajectories of SARS-CoV-2. … reduce virulence as the virus adapts long term to its host …
Rampant C→ U hypermutation in the genomes of SARS-CoV-2 and other coronaviruses: causes and consequences for their short-and long-term evolutionary …
P Simmonds - Msphere, 2020 - Am Soc Microbiol
… the short-term evolution of SARS-CoV-2. Sequence differences between each SARS-CoV-2
full-… sequence generated for each of the four SARS-CoV-2 data sets were calculated. The …
full-… sequence generated for each of the four SARS-CoV-2 data sets were calculated. The …
[HTML][HTML] Controlling long-term SARS-CoV-2 infections can slow viral evolution and reduce the risk of treatment failure
D Van Egeren, A Novokhodko, M Stoddard, U Tran… - Scientific reports, 2021 - nature.com
… evolution in long-term SARS-CoV-2 infections is not addressed directly. As intrahost evolution
… to arise as a result of untreated long-term infections. Our results also suggest another …
… to arise as a result of untreated long-term infections. Our results also suggest another …
Evolution of the SARS-CoV-2 mutational spectrum
… SARS-CoV-2 phylogeny. While our analysis does not determine the cause of the evolutionary
shifts in SARS-CoV-2's … the same mutation spectrum for a sufficiently long period of time. …
shifts in SARS-CoV-2's … the same mutation spectrum for a sufficiently long period of time. …
[HTML][HTML] SARS-CoV-2 escape from cytotoxic T cells during long-term COVID-19
OV Stanevich, EI Alekseeva, M Sergeeva… - Nature …, 2023 - nature.com
… -host evolution, escape from cellular immunity is poorly understood. Here, we report a case
of long-term COVID-19 in … Here, we show a case of long-term evolution of SARS-CoV-2 in an …
of long-term COVID-19 in … Here, we show a case of long-term evolution of SARS-CoV-2 in an …
Purifying selection determines the short-term time dependency of evolutionary rates in SARS-CoV-2 and pH1N1 influenza
… over time. We find that the inferred evolutionary parameters for both pandemics are time
dependent, and that the inferred rates of SARS-CoV-2 and pH1N1 decline by ∼50% and ∼…
dependent, and that the inferred rates of SARS-CoV-2 and pH1N1 decline by ∼50% and ∼…
[HTML][HTML] On the evolutionary epidemiology of SARS-CoV-2
… about evolutionary change to dismissing it. Here we review what little is currently known about
the evolution of SARS-CoV-2 and extend existing evolutionary … In the long run, deleterious …
the evolution of SARS-CoV-2 and extend existing evolutionary … In the long run, deleterious …
[HTML][HTML] The durability of immunity against reinfection by SARS-CoV-2: a comparative evolutionary study
… close coronavirus relatives of SARS-CoV-2 to estimate times to reinfection by a comparative
evolutionary analysis of related viruses SARS-CoV, MERS-CoV, human coronavirus (HCoV)…
evolutionary analysis of related viruses SARS-CoV, MERS-CoV, human coronavirus (HCoV)…
[HTML][HTML] Evolution of immune responses to SARS-CoV-2 in mild-moderate COVID-19
… that SARS-CoV-2 immunity after infection might be transiently protective at a population level.
Therefore, SARS-CoV-2 … and durability than natural infection to drive long-term protection. …
Therefore, SARS-CoV-2 … and durability than natural infection to drive long-term protection. …
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